Paenibacillus odorifer: PODO_12590
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Entry
PODO_12590 CDS
T03326
Name
(GenBank) helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pod
Paenibacillus odorifer
Pathway
pod03420
Nucleotide excision repair
pod03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PODO_12590
03430 Mismatch repair
PODO_12590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pod03400
]
PODO_12590
Enzymes [BR:
pod01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PODO_12590
DNA repair and recombination proteins [BR:
pod03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PODO_12590
MMR (mismatch excision repair)
Other MMR factors
PODO_12590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C_2
AAA_19
UvrD_C
PhoH
AAA_22
AAA_30
SLFN-g3_helicase
DEAD
AAA_16
ResIII
nSTAND3
NACHT
Motif
Other DBs
NCBI-ProteinID:
AIQ74016
LinkDB
All DBs
Position
2868918..2871269
Genome browser
AA seq
783 aa
AA seq
DB search
MDNNESQWKEEQQRVDGVTKLLSAHIRHLSEELGLHRSDVVDMRKDFWEEVTVNFSSPDD
LGETSTSLRQQSQILNERERHHLQSSKALKKYKKLVVSPYFGRIDFTEEPTGGLEKIYLG
IGSLMEDDGTFLIYDWRAPISSLYYDGAPGPAAYETPGGLVSGTMNLKRQFVIADGVIEV
MFDTGVTIGDELLQQVLSHSADDRMKSIVATIQKEQNAIIRNDKSRMLVVQGAAGSGKTS
AALQRVAYLLYKYREVLSADQMLLFSPNPLFNSYVSTVLPELGEENMQQTTFQMYLEHRL
GHEFQLEDVFSQTESLLNAPDGPEVAIRREGIAYKSSVPFLDVIRRYATLLEQEGMLFKP
LMFQGKAVVSKEEMERQFYAYDPAIKLANRVDLMIRWLLKKIADFTHEERNAQWVEDQIE
LLDSSDYHRAYQMLRRKKKASQDSFDDFDTEKEVLSRYVVSQRLKPLRGWTKRGRFVDVK
GLYSTLFTDRELMERLNGDYPLPEVWDDICEQTLESIGVNELAYEDATPFLYLKELSQGF
RTNTLIRHVIVDEVQDYSPFQLEFMRRLFPRAKMTVLGDLNQAIYAQGEVLGDLSSLVSI
YGEENTEVISLTQSYRSTYEIVEFTRSMIPGGERIVPFNRRGEEPQLSVVSSEKELLNAV
EQDIRKLHSEGYHYVAVICKTAEESARVHAELNRSLPVRLVTKETPNFQKGTLVLPAYLA
KGVEFDAVVIFDGSAEQYGRESERKLFYTACTRAMHLLHIFSLGEPSHFIPSANVASLSA
GSL
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
gtggataacaatgaaagtcagtggaaagaggaacagcaacgggttgacggagtaaccaaa
cttctgtcagcccatattcgccatttatcagaggagcttggacttcatcgcagtgatgta
gtggatatgcggaaagacttctgggaagaggtaaccgtaaacttcagtagcccggatgat
ttgggagaaacctcaacaagtcttcgccaacagtcccaaatcctaaatgaacgggaacgt
catcatttgcaatcaagcaaagcgctgaaaaaatataaaaagctggttgtctctccttac
tttggccgaattgatttcaccgaggaaccaactggcgggctggaaaagatttatctagga
attggatcattgatggaggatgatggtacctttttgatttatgactggcgcgcgcctatt
tccagtctgtattatgacggagcccctggtcccgctgcttatgaaacacctggaggatta
gtctccggaacaatgaaccttaaacgccagtttgttattgctgacggtgtaattgaagtt
atgtttgacactggggttacgatcggggatgagctgctgcagcaggtgctaagtcatagc
gctgacgatcggatgaaaagtattgttgctacaattcagaaagagcaaaatgcgattatc
cgcaacgacaaaagcaggatgctagttgtgcaaggagcagcgggaagcgggaaaacgtct
gctgcattgcagcgggtagcttatcttctatataaataccgtgaagtattatcagcagat
caaatgctgctgttctcaccgaatccgctgtttaacagctatgtatctacagtgctcccg
gagctaggcgaagaaaatatgcagcaaacaacgtttcaaatgtatttggaacatcgtctt
ggccatgaattccagctcgaagatgtctttagtcagaccgaaagtctactaaatgctcct
gatggtcctgaggtggctatacgcagagaaggcattgcctataaatcgtctgtacctttc
ctagatgtgattcggcgatatgctacgttgctggaacaggagggcatgctttttaaacct
ttaatgtttcaagggaaagcagtggtcagtaaagaagaaatggaacgccaattctacgcg
tacgatcctgccataaagcttgcgaatcgtgtggatttgatgatccgctggctgcttaag
aagatcgcagattttacccatgaggaaagaaatgcacagtgggttgaagatcagatcgag
ctgctggattccagcgattatcaccgtgcgtatcagatgttgcgccggaagaagaaagct
tcgcaggatagctttgacgattttgataccgaaaaagaagtgttatctcgttatgtagtc
agccagcggctcaaaccactgcgtggttggactaaacggggtcgatttgtggacgttaag
ggcttgtacagcacgttatttacagatcgcgaacttatggagcgcctcaatggtgattat
cctttaccagaggtgtgggatgatatctgtgagcagacattggaatctattggagtgaac
gagcttgcttatgaagacgctacgccattcctttatctgaaggagttaagccaaggcttc
cggaccaacacactgatccgccatgtgattgtagatgaagtacaagactactctccattt
caattagagttcatgcgccgtttatttccaagagcaaaaatgaccgtattaggcgacctg
aaccaggccatttatgcacaaggtgaggtactgggggatttgtctagtctcgtaagtata
tatggtgaagaaaacacagaagtgatttcgttaacccaaagctaccgttcaacttatgag
atcgtggagtttacgcggtcaatgatccctggaggagaacggatcgtaccgtttaatcgg
cggggagaagaaccccagctaagtgtggtatccagcgagaaggagcttctgaatgctgta
gaacaggatatccggaagctgcattctgagggatatcattatgtagctgtcatctgcaaa
acagcggaggaaagcgcaagggttcatgctgaactgaatcgtagcctgccggtaagactt
gttacaaaggaaacgccgaattttcagaaggggacactggttctgcctgcttatttagca
aaaggtgtggagtttgatgcggtcgtcatctttgatggctcggctgaacaatatggcaga
gaaagtgaacgcaaattgttttatacggcttgcactcgggctatgcacttactgcatatt
tttagcctgggtgaacctagtcattttattccgtccgctaatgtggcatctttaagcgcc
ggatcgctgtaa
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