Paenibacillus odorifer: PODO_16235
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Entry
PODO_16235 CDS
T03326
Name
(GenBank) LacI family transcriptional regulator
KO
K10439
ribose transport system substrate-binding protein
Organism
pod
Paenibacillus odorifer
Pathway
pod02010
ABC transporters
pod02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
pod00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PODO_16235
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
PODO_16235
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pod02000
]
PODO_16235
Transporters [BR:
pod02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
PODO_16235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Motif
Other DBs
NCBI-ProteinID:
AIQ74681
LinkDB
All DBs
Position
complement(3660038..3661018)
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AA seq
326 aa
AA seq
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MKLRRRGFIMLASLLLVTTLLSACNNNDSNKSASGSDKPYIPVISKGFQHQFWQAVKQGA
EKAAKEFDVEITFEGPENESQVDKQIEMLQTALDKKPAAIALAALDSKSAIPYLEKAKEN
KIPVIGFDSGVDSDIPVATAATNNKAAAALAADKMAELIGKKGKVGLVIHDQTSSTGQQR
RDGFLEQMKAKYPDIQVLEPQYGGGDQLKSTDLAKAMMQANPDLKGIYGSNEGSAVGVAN
AVNELQMNGKIVVVGFDSGKQLMDAIRSGVVAGAVTQDPIGIGYQAVKAAVQAIKGEAVE
KNIDTGFHWYDKNNMDSDEIKPLLYK
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgaaactacgtcgtagagggtttatcatgcttgccagtctattgttagtcactactttg
ctgagtgcatgtaacaacaatgatagtaacaagagtgcatccggttcagacaaaccatac
attccagtcatatcaaaagggttccagcatcaattctggcaagcggtaaagcaaggagcg
gagaaagctgctaaggagtttgatgttgagattaccttcgaaggtccagaaaatgagagt
caggtggataaacaaattgagatgctgcaaacagctctcgacaagaagccagcagcaatt
gcgctagccgcactagacagcaagtctgcgattccttatctagaaaaggcaaaggaaaat
aagattccggtcatcggcttcgactctggtgtagacagtgatatccctgtagcaacagca
gcgactaacaataaagcagcagctgctttggccgcagataaaatggctgaactgattggc
aagaaaggtaaagtgggccttgtcatacatgaccaaacgagcagcacagggcaacagcgt
cgcgatggcttcttggaacaaatgaaagcaaaatatccggatattcaagtgttagagccg
caatatgggggtggagatcagttaaagtccacagaccttgcgaaagcgatgatgcaggca
aatccggatctgaaaggaatctatggctctaacgaaggttctgctgtaggtgtggctaat
gcagtaaatgaattgcaaatgaatggtaagatcgtagtcgtcggctttgactctggcaag
cagttgatggatgctatccgcagtggtgttgtggctggcgctgttacacaagaccccatt
ggtattggctatcaagctgtgaaggcagctgtgcaagcgattaaaggggaagcggttgaa
aagaacatcgacacggggttccactggtatgataaaaacaatatggattccgatgagatc
aaacctctactatacaaatag
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