Paenibacillus odorifer: PODO_17355
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Entry
PODO_17355 CDS
T03326
Name
(GenBank) beta-xylosidase
KO
K01198
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
pod
Paenibacillus odorifer
Pathway
pod00520
Amino sugar and nucleotide sugar metabolism
pod01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pod00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
PODO_17355
Enzymes [BR:
pod01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
PODO_17355
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_43
GH43_C2
DUF1349
Motif
Other DBs
NCBI-ProteinID:
AIQ74884
LinkDB
All DBs
Position
complement(3891575..3893158)
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AA seq
527 aa
AA seq
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MTRKIVNPVLAGFHPDPSFIRVGDDYYIATSTFEWFPGVEIHHSKDLVHWYSISRVLTEA
SQVDLRGNVSSGSIWAPALSYDQGVFYLLFTDVKSRKSVYKDLHNYLITATDIMGPWSEP
VRLNGSGFDPFLFHDLDGTKWLLNMRWDFRKNHNNFSGIIMQEYDPETGKLTGPIHEIYK
GTPIGVTEGPQLYQKDGYYYLLTAEGGTGINHMVTLARSRSLTGPYETDPDFPIMTTAHD
LTYPFQQAGHGSLVETQNGDWYMAHLCTRPIPGTSTMNPLGRETAIQRCEWTEDGWLRLA
HGGKLPALETVAPELPIFTFEELPNRDDFDGEVLGFPYQSLRVPFDESWVSLKERPGFLR
LRGRESLASLHDQSLIARPIQHFECSATTCLEFEPDSFLQMAGLVLYYDDSDYYYLRVTA
DEIRGTSLGVVLCRGGKYDEISSMQLSVKNWDRYYLKAEIHGRDLLFYASPDGVNWTAVC
TPLDFGTLSDEYGGKLGFTGSYVGVCAQDLDQQAKPAYFDYFEYKAL
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgaaaaattgttaatccggtgttggcaggttttcatccagatccgtcttttatt
agagtaggggatgattattatatcgcaacatctacttttgaatggtttccaggtgtagaa
atccatcattccaaggatctagtccattggtattccatttcacgtgttctgacagaagcc
tcacaagtagatctgcgtggtaacgtaagttctggttccatttgggcaccagcgctttct
tatgatcaaggcgtgttctatctgctatttacagatgtgaaatctcgcaaaagtgtatat
aaagatctgcataactatttaattacagcgactgatatcatgggtccgtggagtgagccg
gttagacttaatggcagcgggtttgatccatttttgttccatgatctggacgggaccaaa
tggctgcttaatatgcgttgggatttccgtaaaaatcacaataacttctctggcatcatt
atgcaggaatatgacccggagactggcaaattaacgggacctatccatgaaatttataaa
gggacacctatcggagtgaccgaaggtccgcaattgtaccagaaggatgggtactattac
ttactgacagctgaagggggcaccggcatcaaccatatggttaccttagctagaagccga
agcctcacaggtccttatgagactgatccggatttcccgattatgaccacggcgcatgat
ctgacctacccgtttcagcaagcaggtcatggatcgctcgtagagactcagaatggggac
tggtacatggcacatttatgcacacgtccgattccgggaacgtcaacgatgaatccgtta
ggccgggaaactgctattcaacgctgtgaatggacagaggatggctggttgcgattggcc
cacggagggaagctgcctgcattggagacagtggctcctgaactgcctatattcactttt
gaggagctgccaaacagagatgattttgatggagaggttcttggatttccataccaaagc
ttgcgtgtgccctttgatgaatcttgggttagcttgaaggaacgcccagggtttcttcgt
ctgcgcggtagagagtcgttagcttcactgcatgatcagagcttaattgcccggccgatt
caacattttgaatgctcagcgacaacctgtctggaattcgagccggatagcttcctgcaa
atggctggattagtcctctattatgatgacagtgattactattatttgcgtgttaccgca
gatgagatccgtggaactagtttgggcgttgtgctgtgtagaggtggcaaatacgatgag
atttcctctatgcagctatctgtgaagaattgggatcgttattatctaaaggcggaaatt
catggacgtgatctgttgttttatgcctctccagatggggtgaattggacagctgtctgt
actcccttagattttggcacgctttcggatgaatatggcggtaagctcggctttaccggt
tcctatgtcggggtatgtgctcaggatttggatcagcaagcgaagccggcttattttgac
tattttgaatataaagctttatag
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