Paenibacillus odorifer: PODO_17860
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Entry
PODO_17860 CDS
T03326
Name
(GenBank) MFS transporter
KO
K08151
MFS transporter, DHA1 family, tetracycline resistance protein
Organism
pod
Paenibacillus odorifer
Brite
KEGG Orthology (KO) [BR:
pod00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pod02000
]
PODO_17860
01504 Antimicrobial resistance genes [BR:
pod01504
]
PODO_17860
Transporters [BR:
pod02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
PODO_17860
Antimicrobial resistance genes [BR:
pod01504
]
Gene variants
Tetracycline resistance genes
Transporters
PODO_17860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
PUCC
MFS_3
TRI12
DUF6594
Motif
Other DBs
NCBI-ProteinID:
AIQ74969
LinkDB
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Position
4020526..4021761
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AA seq
411 aa
AA seq
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MFKFRSHNKQNIDQSVDKHALIFGLISVFLCGIGFSIIMPVVPFLVQPYISNPGEQAIVV
TLLTSVYAVCVFFAAPALGALSDKYGRRPLLLVCLLGSAIGYFVFGIGGALWVLFVGRII
EGITGGSIGTIFAYFADIIPPEQRTKYFGWVSAVVGVGTVIGPTLGGLLAKFGYSVPMYF
GAIITLLNVLYGFFFMPESLDKNNRLKEITLVRLNPFTQLASILSIKNLKRLLVSAFLLW
IPNGSLQAVFSQFTMDTFSWKPALIGLMFSIMGFQDILSQGFIMPKLLLKLSDKQIAILG
MVSEIIGYSLIALSALFSYYPLFIAGMFIFGFGDSIFGPSFNGMLSKSVDSSEQGRIQGG
SQSIQALARMIGPVIGGQIYVSLGHAAPAFMGMILIAAAISVLYKDTRVNM
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaattcagatcacataataaacagaacatagatcaatccgtagataaacacgct
ctaatcttcggtttgatctctgtgtttctgtgcggaataggcttcagtatcatcatgccc
gttgtcccctttttagtgcagccttatataagcaatccgggagaacaggctatagttgtc
acactgctgacctctgtttatgcagtctgcgtattttttgcagcccctgcacttggagct
ttgagtgacaaatacgggcgtcgtccattacttttggtatgccttttaggttccgcaatt
gggtactttgtttttgggataggaggagcgttatgggtactttttgttggacgcataata
gaaggtataacaggcggaagcataggtactatcttcgcctattttgctgatatcattcct
ccagaacagagaactaaatactttggctgggtgagtgcggtagtaggtgtaggtaccgtc
attggtccaacgctaggcggattacttgccaagtttggttattctgtacccatgtatttt
ggagccataataaccttattgaatgttctttacggattcttttttatgcctgagagcctt
gacaagaacaatagactgaaagaaattaccttggtaagactgaatccatttacacagctt
gcaagcatattgtccataaaaaacttaaaaaggctactggtctcagcattcttactttgg
atacccaacggatctttacaggctgttttttcacaattcacaatggatactttcagctgg
aagcctgcactaatcggactgatgttttcaattatgggcttccaagacatcctttcacag
ggtttcatcatgcctaagcttttgctgaaacttagtgataaacagatcgcaattcttgga
atggtttcggagattataggctacagtctcattgcgctatctgctttgttctcatactat
ccgctttttatcgctggaatgtttatatttggttttggggattcgatttttgggccttca
ttcaatgggatgctctccaagtctgtcgattctagtgaacaaggaaggattcaaggaggt
agccaatctattcaggctttagccagaatgattggacctgtcattggaggtcaaatttat
gtatcacttggtcatgccgcacccgcttttatggggatgatcctgatagctgcggcaata
tccgttttgtataaggatacgcgtgtaaatatgtaa
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