Paenibacillus odorifer: PODO_18225
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Entry
PODO_18225 CDS
T03326
Name
(GenBank) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pod
Paenibacillus odorifer
Brite
KEGG Orthology (KO) [BR:
pod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pod03016
]
PODO_18225
Enzymes [BR:
pod01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PODO_18225
Transfer RNA biogenesis [BR:
pod03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PODO_18225
Prokaryotic type
PODO_18225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AIQ75037
LinkDB
All DBs
Position
complement(4100299..4101213)
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AA seq
304 aa
AA seq
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MSELEGVLAVYKPAGFTSHDVVAKARRILGMKRIGHTGTLDPQVTGVLPLCLGRATRVVE
YIQELPKEYVATLRLGMSSDTEDLTGTITESVDEVHVSEEEILAVLASFKGVISQVPPMY
SAVKVDGKRLYELAREGKTVERKSREVEIYEIEMTDMTWEGNHPDITFRVLCSKGTYIRT
LCVDIGRALGLPGVMVKLERTMSAGISASHCLSLEDIAAHKEAGTLEDHLIAADEAISHL
PKHTVMDEKKKAALQGQRLSSRFIAPEVKTAGQIRLYDLQGLFLGIYELEETGAIAPVKV
FAQA
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaattagaaggtgttctggcggtttataaaccggcaggcttcacttcacatgat
gttgtagccaaggcacgccgtattctcggcatgaaacggattggtcatacggggacacta
gatccccaagtgactggtgtattgccgctttgtctgggacgtgcgactcgcgttgtggag
tatattcaggagctgcccaaagaatatgtggcaacactgagactggggatgtccagtgat
actgaagacttaactggaaccattacggaaagtgtagatgaggttcatgtatctgaggaa
gagattcttgcagtgcttgcctctttcaaaggtgtaatttctcaggttcctcccatgtac
tctgcggtgaaagtggatggcaaacgtctttatgaattggctagagaaggcaagaccgtt
gaacgaaaaagtcgtgaagtagagatttatgaaatcgaaatgacggatatgacttgggaa
ggtaatcatcccgacatcactttccgggtattatgctccaaaggcacgtatattcgaaca
ctttgtgttgatatcggtcgtgcgcttggactgccgggtgtaatggtgaagctggagaga
acaatgtcggcaggaatttctgccagccattgtttatcccttgaggatattgccgcgcac
aaggaagccggaacattagaagatcatttaatcgctgctgatgaggcaatttcgcatttg
cctaagcataccgttatggatgagaagaagaaggcagcactgcagggtcaacgtttgtct
tcgcggttcattgctccagaagtgaagacagcaggtcaaattcggctatacgatcttcag
ggattgtttcttggcatttatgagctggaagagacaggtgctattgccccagtaaaagtg
tttgcacaagcttaa
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