Paenibacillus odorifer: PODO_18255
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Entry
PODO_18255 CDS
T03326
Symbol
nusA
Name
(GenBank) transcription elongation factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
pod
Paenibacillus odorifer
Brite
KEGG Orthology (KO) [BR:
pod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pod03021
]
PODO_18255 (nusA)
03009 Ribosome biogenesis [BR:
pod03009
]
PODO_18255 (nusA)
Transcription machinery [BR:
pod03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
PODO_18255 (nusA)
Ribosome biogenesis [BR:
pod03009
]
Prokaryotic type
rRNA transcription factors
PODO_18255 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
S1
KH_NusA_C
DnaB_2
Motif
Other DBs
NCBI-ProteinID:
AIQ75043
UniProt:
A0A1R0WS38
LinkDB
All DBs
Position
complement(4105932..4107029)
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AA seq
365 aa
AA seq
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MSMEFIEAMNELERERGISKDVLFEAIEAALISSYKRNFNAAQNVRVDMNRNTGVIKVFA
RKLIVEEVLDTRTEISLPAAREINPHFQLEDIAELEVTPRDFGRIAAQTAKQVVTQRIRE
AERGLIYNAFIDKEDDIVTGLVQRQDMRNIYIDLGKIEAVLPLSELMPGEKFKQSERIKA
YITKVENTTKGPQIMLSRSHPGLLKRLFELEVPEIFDGVVEIRSVAREAGFRSKIAVYSR
NPEVDPVGSCVGPRGTRVQTIVTELRGEKIDIVRYSDLVQEYVANALSPSKVLEVQVFEA
EKMARVIVPDYQLSLAIGIKGQNARLAAKLTGWKIDIKSETQAEQEYGRPKSSIDEMHQD
SVSID
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgagtatggagtttattgaagcaatgaatgagctggagagggagagaggcatcagtaaa
gatgtgctgtttgaagcgattgaagcggcgctgatctctagttataaacgtaatttcaat
gcagcacagaacgtgcgtgttgacatgaatcgcaatacaggtgtcattaaagtgtttgcc
cgcaagttaattgttgaggaggtcctggatacaaggactgaaatctcattgccggcagcc
agagaaattaacccgcatttccagctggaagatatcgctgagcttgaagtgacaccgcgt
gattttggacgtattgccgcacagactgctaagcaggttgtaactcaacggattcgcgaa
gcagagcgtggacttatctataatgcttttatcgacaaagaagatgatatcgttactgga
ctagttcaacgtcaagatatgcggaacatttacattgatcttggtaaaatcgaagcggtt
cttccgcttagcgaattgatgccaggtgaaaagttcaaacaaagcgaacgcatcaaggct
tatatcacaaaagttgagaatacaacaaaaggtccgcagattatgctctcccgcagtcat
cctggattactgaagcgtctgttcgagcttgaagttcctgaaatatttgacggtgtagtt
gagattcgttctgtagctcgtgaagctggcttccgctcgaagattgctgtgtattcccgc
aatccagaagtagatcccgttggttcttgcgtaggtccaagaggcacacgcgttcagacc
atcgttactgagcttcgcggtgagaagatcgatatcgtccgttattctgatctggtgcag
gaatatgttgcgaatgcactaagcccttccaaggttcttgaagttcaagtctttgaagcg
gagaagatggcgagagttatcgttcctgactatcaattatcactggctatcggtattaaa
gggcaaaatgcacgtcttgccgctaaacttaccggctggaaaattgatatcaagagtgaa
actcaagcggagcaggaatacggcagaccgaaatcttctattgatgaaatgcatcaggat
tccgtctccatagattaa
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