Paenibacillus odorifer: PODO_18530
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Entry
PODO_18530 CDS
T03326
Symbol
sucC
Name
(GenBank) succinyl-CoA synthetase subunit beta
KO
K01903
succinyl-CoA synthetase beta subunit [EC:
6.2.1.5
]
Organism
pod
Paenibacillus odorifer
Pathway
pod00020
Citrate cycle (TCA cycle)
pod00640
Propanoate metabolism
pod00660
C5-Branched dibasic acid metabolism
pod00720
Other carbon fixation pathways
pod01100
Metabolic pathways
pod01110
Biosynthesis of secondary metabolites
pod01120
Microbial metabolism in diverse environments
pod01200
Carbon metabolism
Module
pod_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pod_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pod00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PODO_18530 (sucC)
00640 Propanoate metabolism
PODO_18530 (sucC)
00660 C5-Branched dibasic acid metabolism
PODO_18530 (sucC)
09102 Energy metabolism
00720 Other carbon fixation pathways
PODO_18530 (sucC)
Enzymes [BR:
pod01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
PODO_18530 (sucC)
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Gene cluster
GFIT
Motif
Pfam:
ATP-grasp_2
Ligase_CoA
Citrate_synth_N
ATP-grasp_5
GARS_A
CPSase_L_D2
Motif
Other DBs
NCBI-ProteinID:
AIQ75097
UniProt:
A0A1R0Z5A4
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All DBs
Position
complement(4160944..4162104)
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AA seq
386 aa
AA seq
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MNIHEYQGKEVLKKYGVAVPNGKVAYTVEEAVEAAESLSTPVVVVKAQIHAGGRGKAGGV
KVAKNIDEVRSYATEILGKTLVTHQTGPEGKVVKRLLIEEGCQIVKEYYIGIVVDRGTGR
VVMMASEEGGTEIEEVAATHPEKIFKEIIDPAVGLQTFQARKLAYSISIPNELVGKTVKF
MQALYLAFVDKDCSIAEINPLVVTADGNVMALDAKLNFDSNALFRHKDILELRDLDEEDL
KEIEASKYDLSYIALDGNIGCMVNGAGLAMATMDIIKYYGGEPANFLDVGGGATTEKVTE
AFKIILSDEKVNGIFVNIFGGIMRCDVIANGVVEAASQLGLTKPLVVRLEGTNVGLGKQI
LAGSGLNIVAADSMADGARKIVSLVQ
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaatatccacgagtatcagggaaaagaagtgcttaagaagtacggtgtagccgtaccg
aatggaaaagtagcttatacagtggaggaagcggtagaagccgcagagtcactgagcaca
ccagttgttgtagttaaagctcagattcacgcaggtggacgcggtaaagctggaggagta
aaggttgctaagaatatcgatgaggtgcgtagttacgcaactgagattcttggaaagact
ctagtaactcaccagactggaccggagggtaaggtagtaaaaagactgctcattgaagag
ggttgtcaaattgttaaggagtattacattggtatcgtagttgacagaggaactggccga
gtggtcatgatggcttctgaagaaggcggtactgagattgaagaagtagctgcaacacat
ccggagaaaatttttaaagagatcattgatccggcagtgggtttgcagactttccaggcg
cgcaagctggcttacagcatctctattcccaatgagctggtaggcaaaactgtgaaattc
atgcaagcgctatatttagctttcgtggataaagattgctctattgccgaaattaaccca
ttggtagtgactgcggatgggaatgtgatggcactggatgccaaactgaattttgattcc
aatgccttgttccgtcataaggatattctagagctgcgggatttggatgaagaggattta
aaggaaatcgaagcctcgaagtatgaccttagctatattgcgcttgatggcaatattggg
tgcatggtaaacggtgcaggtctcgcgatggcgactatggatattattaagtattatggg
ggcgaacccgccaacttcttggatgtaggtggcggtgcaacgaccgagaaggtaacagaa
gcctttaaaatcattttatcggatgaaaaggtgaatgggatttttgttaatattttcggc
ggtattatgcgctgtgatgttatcgctaacggtgttgtagaagcggctagtcaactgggt
ttgaccaaaccgctggttgtgcgtcttgagggaacaaatgttggattaggcaagcagatt
ttggctggatcgggacttaatattgttgctgctgattctatggcggacggtgcccgtaag
attgtgtctcttgtgcaataa
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