Paenibacillus odorifer: PODO_20175
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Entry
PODO_20175 CDS
T03326
Name
(GenBank) pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
pod
Paenibacillus odorifer
Brite
KEGG Orthology (KO) [BR:
pod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pod03009
]
PODO_20175
Enzymes [BR:
pod01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
PODO_20175
Ribosome biogenesis [BR:
pod03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PODO_20175
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AIQ75393
UniProt:
A0A1R0WX84
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All DBs
Position
4507140..4507886
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AA seq
248 aa
AA seq
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MTQHSSGNNEAVSGGSQRFEVLYEDNHLLGIVKPVNIPVQEDATGDPDLLNLLKEDVKER
FNKPGNVYIGLVHRLDRPVGGAMIFAKTSKAASRLSESVRTHGFHKVYLTVVHGKPPATR
GRLTDTLLKDAKSNTVTVVRKGTPGGKEAILDYTVLDSAEGYSLLKIDLLTGRSHQIRVQ
LSSIGCPLYGDQKYGASVNRPGQQIALWSALVGFPHPVTKEEVELISLPPQTHPWDLWPR
ETLKKGLF
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgacacagcatagttccggcaacaatgaggctgtaagcggcggatcacaacgctttgaa
gtgttgtacgaagacaaccatcttctggggattgtaaaacccgtgaatattcctgttcag
gaggatgcaacaggcgatcctgacctgctgaacctgctgaaagaagatgtgaaggaacgt
ttcaacaaacccggcaacgtctatatcggtctggtccaccgtttggatcgaccggttggg
ggagcaatgatttttgccaagacttccaaagcggcttcaagactatccgagagtgtccgt
actcacggctttcataaggtgtatttaacagtcgtgcatggtaaaccgccagccactcgt
ggccgtcttacagatacgctgcttaaagacgcaaagagtaacaccgtcactgtggttcga
aaaggaactcccggcggcaaggaagcaattctggattacacagttcttgacagtgcagaa
ggatacagcctgcttaagattgatttacttacaggccgttcccaccaaattcgggtgcag
ctaagttcgatcggctgtccattatacggtgatcagaagtacggggcttcagtgaacaga
ccggggcaacaaattgcgttatggtcagcacttgtaggattccctcaccctgttactaaa
gaagaagtggaactcatctctctgcccccacaaacccatccttgggatctgtggccgcgg
gaaacactaaaaaaagggctgttctaa
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