Paenibacillus odorifer: PODO_20320
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Entry
PODO_20320 CDS
T03326
Name
(GenBank) isopropylmalate isomerase
KO
K01703
3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
pod
Paenibacillus odorifer
Pathway
pod00290
Valine, leucine and isoleucine biosynthesis
pod00660
C5-Branched dibasic acid metabolism
pod01100
Metabolic pathways
pod01110
Biosynthesis of secondary metabolites
pod01210
2-Oxocarboxylic acid metabolism
pod01230
Biosynthesis of amino acids
Module
pod_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:
pod00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
PODO_20320
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
PODO_20320
Enzymes [BR:
pod01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
PODO_20320
4.2.1.35 (R)-2-methylmalate dehydratase
PODO_20320
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Ortholog
Paralog
GFIT
Motif
Pfam:
Aconitase
Motif
Other DBs
NCBI-ProteinID:
AIQ75419
UniProt:
A0A1R0WXC3
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All DBs
Position
complement(4545729..4547153)
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AA seq
474 aa
AA seq
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MSNKTMFEKIWENHVIHQEEGKPSIIYIDLHLVHEVTSPQAFEGLRLSNRKVRRPELTFA
TMDHNVPTKDRFNIKDPISKQQIDTLSKNCADFGVRLFDLNDIDQGVVHVMGPEIGLTHP
GKTIVCGDSHTSTHGAFGALAFGIGTSEVEHVMATQCLQQSKAKTMEVRFTGKRNPGVTA
KDMILGVIAKYGTDFATGYVIEYTGEAIRELSMEERMTVCNMSIEGGARAGLIAPDETTF
NYLRGRQYVPQGEAYDAAVEAWKSLVSDEGAQYDTVVEFDVETLIPQVTWGTSPGMGTDI
NSSVPNPADFTTENERKAAEKALEYMDLTPGTPISEIPIDYVFIGSCTNGRIEDLRAAAV
VAKGHKVSEKVTAIVVPGSGRVKMQAEKEGLDKVFTEAGFEWREAGCSMCLAMNPDVLQP
GQRCASTSNRNFEGRQGRGGRTHLVSPAMAAAAAIKGRFTDVRDWNYKTEAVSS
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacaagacaatgtttgagaagatttgggagaatcacgttattcatcaagaggaa
ggtaaacctagcattatttatattgatctgcatttggttcatgaagtaacttctccacag
gcttttgaagggcttcgtctcagcaaccggaaggttcgccgtcctgagctgaccttcgca
acgatggatcataacgtaccaactaaagatcgttttaacattaaagatccaatctccaag
caacaaattgataccctttctaagaactgtgctgattttggtgtaagactgttcgatctg
aatgatattgatcaaggcgttgtacacgtaatgggtcctgaaatcggcttgacacatcct
ggcaaaactatcgtttgcggcgacagccatacctcaacgcatggtgcattcggcgcactg
gcattcggtatcggaactagtgaagttgaacatgtaatggctacgcaatgtttgcagcaa
tccaaagctaagacaatggaagtacgctttacaggcaaacgtaaccctggcgtaacagca
aaagatatgatcctaggtgttattgctaagtacggtactgattttgccacaggttatgta
attgagtatacaggcgaagctattcgtgaattgtcgatggaagaacgtatgactgtctgc
aatatgtcgatcgaaggtggagcaagagctggcttgattgcccctgatgaaactactttt
aattatctgcgtggacgtcaatacgtaccgcaaggcgaggcttatgatgctgctgtagaa
gcatggaagagtcttgtaagcgacgagggcgctcagtacgatacggttgttgaatttgat
gtggaaacattgattccacaagtgacctgggggactagcccgggcatgggtactgacatc
aactccagcgtaccgaatccggctgacttcaccactgaaaatgaacgtaaagctgctgaa
aaagcgcttgaatatatggatttgactcctggaacacctatttctgaaattccgattgat
tatgtatttattggttcctgcactaacggacggatcgaagatttgagagctgcagcagtg
gtagctaaaggtcataaggtttctgaaaaggttactgccattgttgttccaggctcgggc
cgtgttaagatgcaggctgagaaagaaggacttgataaagtctttactgaagctggcttt
gaatggcgtgaagcgggatgcagcatgtgcttggccatgaacccggatgttctgcagcct
ggacaacgctgtgcatctacctcgaaccgtaactttgaaggacgccaaggacgcggagga
cgtacacatctggtatctccagctatggcagccgcagctgcgatcaaaggtcgtttcact
gatgtacgtgattggaattataagacggaagccgtcagctcatag
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