Paenibacillus odorifer: PODO_20665
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Entry
PODO_20665 CDS
T03326
Name
(GenBank) DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
pod
Paenibacillus odorifer
Brite
KEGG Orthology (KO) [BR:
pod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pod03032
]
PODO_20665
03036 Chromosome and associated proteins [BR:
pod03036
]
PODO_20665
03400 DNA repair and recombination proteins [BR:
pod03400
]
PODO_20665
DNA replication proteins [BR:
pod03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PODO_20665
Chromosome and associated proteins [BR:
pod03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
PODO_20665
DNA repair and recombination proteins [BR:
pod03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
PODO_20665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
DUF2267
Ribosomal_L12
HU-DNA_bdg
HU-CCDC81_euk_1
Rpf1_C
Motif
Other DBs
NCBI-ProteinID:
AIQ75482
UniProt:
A0A1R0YZZ1
LinkDB
All DBs
Position
complement(4610397..4610669)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSDLINVVTEATELPKKDATKAVDAVFEAITEALQSGDKVQLVGFGNFEVRERSARKG
RNPQTGEEIEIPASKVPAFKPGKALKDGIK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatcagatttgatcaacgtagttacagaagcaactgaacttcccaagaaggat
gctactaaagctgtagatgcggttttcgaagcaattacagaagcactgcaaagcggtgat
aaagtacaactggttggattcggaaactttgaagtgcgtgagcgttctgcacgtaaaggc
cgtaacccgcaaactggtgaagaaatcgaaattcctgcaagcaaggtaccggcattcaaa
cccggtaaggcgctgaaagacggaatcaaataa
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