Paenibacillus odorifer: PODO_20955
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Entry
PODO_20955 CDS
T03326
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pod
Paenibacillus odorifer
Pathway
pod00300
Lysine biosynthesis
pod00470
D-Amino acid metabolism
pod01100
Metabolic pathways
pod01110
Biosynthesis of secondary metabolites
pod01120
Microbial metabolism in diverse environments
pod01230
Biosynthesis of amino acids
Module
pod_M00526
Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
pod_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pod00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PODO_20955
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PODO_20955
Enzymes [BR:
pod01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
PODO_20955
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
AIQ75536
LinkDB
All DBs
Position
complement(4666496..4667830)
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AA seq
444 aa
AA seq
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MFLHGTSRINDAGHLEIGGCDVTELKAEYGTPLYILDEQLVRQRCREYMDAFKASGLGFQ
VAYASKAFSVMAMVRLADEEGLSLDVVSDGELYTALQAGFPAERIHFHGNNKTSEEIEMA
IDAKIGCFVVDNLVELNLLQSIAARKEVNVNILLRVTPGVEAHTHEYTATGQTDSKFGFD
IGNGSAYEAVKAAISKKNITLLGVHSHIGSQIFETDGFQLAVERVATFARSVKEGLEVDF
RVVNLGGGFGIRYVEGDTPLHVSEYVAAITDAVKTHFAGIYSALPEIWVEPGRSIVGDAG
TTLYTVGSNKDIPGVRKYVAVDGGMTDNPRPALYQSKYEALLANRANEDATETVSIAGKC
CESGDMLIWDVELPKAESGDLLAVACTGAYNYSMASNYNRLRRPALVFVQNGQSDLVVRR
ESYTDLIANDIVPERIAKQTVVAK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtttctacacggtactagccgcattaacgatgctgggcatttggagatcggcggatgt
gatgtaactgaattgaaagcggaatatggaaccccgctatatatattggacgagcaattg
gttagacaacgttgccgggaatatatggatgcttttaaagcctccggccttggtttccaa
gtagcttacgcaagcaaggcgttttcagtaatggcaatggttcgtttggctgatgaagaa
ggtttgtcactggatgttgtatctgacggcgaactatatacagctttgcaagctggcttc
ccggcagaacgtattcattttcatggcaacaataagacatctgaagagattgaaatggcg
attgatgccaaaatcggctgctttgtagtcgataatctggtagagcttaaccttttgcag
tccattgccgcacgtaaagaagttaatgtgaacatcttattgcgggtgacaccaggtgta
gaagcgcatactcatgaatataccgcaactggccagacggattccaaattcggttttgat
atcggtaatggatcggcctatgaagcagtgaaagcagcaatcagcaaaaagaatatcacg
ctgcttggtgtgcattcccatattggttcgcagatctttgaaaccgatggtttccagctg
gctgttgagcgtgtggcaacttttgcccgcagtgttaaagaaggcttggaagtggacttc
cgtgtagtcaatcttggcggaggtttcggcattcgttatgttgagggagataccccacta
catgtttctgaatatgttgcagcgattacggatgcagtgaagactcattttgcgggaatt
tatagtgctttgccggaaatttgggtggagccgggccgtagtattgttggagatgcaggt
actacattgtacactgtaggatctaacaaggacattcctggcgtgcgtaagtacgttgct
gttgatggtggaatgaccgacaatccacgccctgctttgtatcagtctaaatacgaggca
ttgcttgctaaccgtgctaacgaagacgcaactgagactgtctccatcgctggtaaatgc
tgcgagagcggagatatgttgatctgggatgtagagctgccgaaggctgaaagcggcgat
ttgttggctgtagcctgcacaggtgcgtacaattactccatggccagcaactataaccgt
cttcgccgtccggctttagtattcgtacagaacggacaaagcgatcttgtagtgcgtcgt
gaaagctatactgatcttattgccaacgatattgttccagagcgtatcgccaaacagaca
gttgttgctaagtaa
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