Paenibacillus odorifer: PODO_21545
Help
Entry
PODO_21545 CDS
T03326
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
pod
Paenibacillus odorifer
Pathway
pod03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PODO_21545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pod03400
]
PODO_21545
Enzymes [BR:
pod01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
PODO_21545
DNA repair and recombination proteins [BR:
pod03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
PODO_21545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
Ecotin
Ribosomal_S21
Motif
Other DBs
NCBI-ProteinID:
AIQ75638
LinkDB
All DBs
Position
complement(4790688..4792067)
Genome browser
AA seq
459 aa
AA seq
DB search
MAAERQVYSIKELNRYIRMKLDSDNLLSDVWIRGEISNFTHHGSGHMYFTLKDESSRIKA
IMFASHNQRLPFIPKEGARVIARGNVTVYERDGQYQFYATHMQPDGIGSLYLAYEQLKSK
LEKEGLFAEARKRSLPRFPKCIGVITSPTGAAVRDIVITLQRRFPQVAIVIYPVLVQGKG
AAPSIVKAIGALNAMGEADVLIVGRGGGSLEELWAFNEEEVARAISASRIPVISAVGHET
DFTIADFAADLRAATPTAAAELAVPHAGELAAQLRQLQQRLRQALQQRAQRGRERHSVLQ
RSLALAGPRRTLIQHTQRLDMLRERLQRSADARLSRSRERKAVLHHSLQRFHPRDSVAAA
RQRTDSMRRELMGAMQARLQEKRSRYVAEIRHLDALSPLKVMSRGYSLVYDEAEEHLIKS
LTEVQLGDLVVIKMNDGQLNCQVWGMKEDGKDDDEGSGT
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagagcggcaggtttattcgataaaagaactcaaccgttatatccgcatgaag
ctagactcggataatttactttcggatgtgtggattcgcggagagatttccaactttaca
catcatggcagcgggcatatgtatttcacacttaaggacgagagcagccgcattaaagcg
attatgttcgcttctcataaccagcggctgccttttattccgaaagaaggcgctcgggta
attgccagaggtaatgtgaccgtttatgaacgggatgggcaataccagttctatgccaca
catatgcagcctgatgggattggcagtttatatctggcctatgagcagctgaagagcaag
cttgaaaaagaaggcctttttgcagaagctcgcaagcgttcgttgccgcggttcccgaag
tgtattggtgtgattacatccccaacaggagcagctgtacgagatattgtgattacgctt
cagcggcggtttccgcaggtagctattgtaatctatcccgtactggtgcaaggcaaaggc
gctgcgccttcgatagtgaaggcgattggcgcgctgaacgccatgggtgaagccgacgtg
cttatcgtcggccgcggcggcggttcgctggaggagctgtgggcgttcaacgaggaggaa
gtcgcacgagcgatatcggcatcaaggattccggtcatctcggccgtcggccacgagacc
gatttcacgattgccgatttcgccgccgacctccgcgcggctacgcccacagcggccgct
gagctggccgtgcctcatgccggcgagctagctgcgcagcttcgccagctgcagcagcgg
ctgcgccaagcgctgcaacaacgcgcccagcgtggacgcgagcgccactcggtgctgcag
cgctcgctggcgctggcaggcccgcgccggacgctgattcagcacacgcagcggttggac
atgctgcgtgagcggctccagcgctcagcggatgcacggctcagccgttcccgcgagcgt
aaggcggtgctgcatcacagtctgcagcggttccatccgcgcgacagtgttgccgcagca
cgtcagcgcacggacagcatgcgccgtgagttaatgggcgctatgcaggctcgtttgcag
gagaagcgatctcgctatgtggcagagattcgtcacctggatgcgctgagcccgctaaaa
gtaatgtcgcgcggctacagcttagtgtatgacgaggcggaagaacatttaatcaaatcg
ctgaccgaagtgcagcttggcgatcttgtggtgataaagatgaatgacggacagctgaac
tgccaagtatgggggatgaaggaggatggcaaagacgatgacgaaggaagcggaacttga
DBGET
integrated database retrieval system
