Paenibacillus odorifer: PODO_23350
Help
Entry
PODO_23350 CDS
T03326
Name
(GenBank) stage V sporulation protein D
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
pod
Paenibacillus odorifer
Pathway
pod00550
Peptidoglycan biosynthesis
pod01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pod00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PODO_23350
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pod01011
]
PODO_23350
Peptidoglycan biosynthesis and degradation proteins [BR:
pod01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
PODO_23350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
AIQ75943
LinkDB
All DBs
Position
complement(5172892..5174817)
Genome browser
AA seq
641 aa
AA seq
DB search
MKVSKVVTRRRMLWTLLGLAVLFGSLVVRLAYVQLSQGEELTAKVEDSLRRNIPFTAKRG
EIMDREGVPLVSNITTPTVYAVPVQVKEKQKTAQQLAPLLGMTEEKLMTLLSKKEMSVKL
QPGGRKITMDLAASIRDLQLPGIVVAEDSKRYYPYGDLAAHILGFTGIDNQGITGVESIY
DNLLKGIAGNISYLSDAGGRLMPGSSEKYSAPQDGLNLELTIDKQIQSIMERELDQAMVK
YQAQGAWAIAMNPKNGEILAMASRPGYEPASYKEYDAQIYNRNLPIWMTYEPGSTFKIIT
LAAALQEGKVDLQNDHFYDPGFIEVAGAKLRCWKKGGHGSQTFLQVVENSCNPGFVALGQ
RLGKESLFKYIRDFGFGSKTGIDLNGEANGILFKLSQVGPVELSTTAFGQGVSVTPIQQI
AAVSAAINGGNLYKPHVTKAWVNPVTGETVSEVKPELVRQVISEETSKKVRAALESVVAK
GTGRPAFIDGYRVGGKTGTAQKVVNGRYSPTEHIVSFIGFAPADDPQIVVYTAVDNPKGI
QFGGVVAAPIVQNILEDSLHYMKVPERSDQLPKTYKYGETPIVTVPDLTGATVQDIYEDL
NMNFNLARSGTGNTVINQAPKAGARVEQGSTIRIYMGASSE
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtttccaaagtcgtaacacggcggagaatgctgtggacattgctgggactggca
gtgttattcggttcgctggtcgtgcgtcttgcgtatgtgcaattatctcaaggcgaggaa
ttgactgcgaaggtagaagattccttgcgccgcaatattccttttaccgctaaacgtggt
gaaattatggatcgtgaaggtgtgccgctcgtttctaatatcaccacacctacagtgtat
gcagtaccggtgcaggtaaaagagaagcaaaagacagcacagcaattagctccactgctt
gggatgactgaggagaagctgatgacattgctgtccaaaaaagaaatgtcggtgaaactt
cagcccggcggccgcaaaattacgatggatcttgccgcgagcatccgtgatttgcagctg
ccgggcatcgttgtcgctgaggatagcaaaagatattacccttacggcgatttagccgcg
catattttaggcttcacaggtatagataaccagggtattacaggagtagagagtatatat
gacaatctgctcaaaggcatagccggcaatatttcttatttgtctgatgcaggcggaaga
cttatgcctggctcatctgagaaatattctgcccctcaagacggacttaatctggagctg
acgattgataaacagatccagtccattatggaacgtgagctggatcaggctatggtaaaa
tatcaggcgcagggtgcttgggctatagctatgaatccgaagaatggtgagatactagcc
atggctagcagaccggggtatgaaccagcatcatacaaggaatatgatgcgcagatttac
aaccggaatctgcctatctggatgacctatgaacctggttcaacgttcaaaatcattact
ctggctgctgcgctgcaggaaggtaaagtagatcttcagaacgatcatttctatgatccg
ggttttatcgaggtagcgggcgcaaagctgcgctgctggaaaaagggcggccacggtagt
caaacctttttacaggtagttgagaactcctgtaaccctgggtttgtcgccttagggcaa
cggctgggaaaagaatcacttttcaaatatattcgtgattttggttttggcagtaaaacg
ggaattgatctgaatggggaagctaatggcattctgttcaagctcagtcaagtaggtccg
gtagagctttcgactacagccttcggccaaggggtttcggttacgcctattcagcagatt
gctgcggtatccgcggctatcaacggcggtaatctctataaaccgcatgtaacaaaagca
tgggttaacccggttacgggagagactgtatcagaggtgaagccagagcttgtgcggcag
gtcatttcggaggaaacatccaagaaggtgcgggcagcacttgagagcgtggttgccaaa
ggcacaggacggccggcttttattgacggctatcgtgtaggtggcaagacgggtactgca
cagaaggttgtaaatggacgttattctccaacagagcacattgtttcttttattggcttt
gcgccagcggatgatcctcagatcgttgtgtacactgccgtggataatccgaaagggatt
caatttgggggtgtggttgcagctccaatcgtgcaaaatattttggaagactcactgcac
tatatgaaggttccggagcgcagtgatcagcttcccaaaacttataagtatggcgaaact
ccgatagtgaccgtacctgatcttaccggagcaacggtgcaggatatctatgaggattta
aatatgaattttaatcttgcacgttcaggcacaggaaatacggtcatcaatcaagctcct
aaggctggggccagagtagaacagggctcaaccatcaggatttatatgggagcatctagt
gaataa
DBGET
integrated database retrieval system
