Paenibacillus odorifer: PODO_23655
Help
Entry
PODO_23655 CDS
T03326
Name
(GenBank) hypothetical protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pod
Paenibacillus odorifer
Brite
KEGG Orthology (KO) [BR:
pod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pod03400
]
PODO_23655
DNA repair and recombination proteins [BR:
pod03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PODO_23655
Archaeal homologous recombinant proteins
PODO_23655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
AAA_21
ABC_tran
MMR_HSR1
DUF87
Motif
Other DBs
NCBI-ProteinID:
AIQ76003
LinkDB
All DBs
Position
complement(5237569..5240985)
Genome browser
AA seq
1138 aa
AA seq
DB search
MKPILLKVAGLQSYREMQEIDFESLCETGLFGIFGPTGSGKSSLLDAITLAMYGKVERAV
NGTQGIMNHSEDSLSVAFTFELTSSAGAHRYRVERKFKRTGEQTVSNTISRFIEVTPDGD
NVMADKLADVTRCVEEHIGLKMDDFTRAVVLPQGKFAEFLSLRGVDRRQMLQRLFHLEQY
GDQLALKLSRRVKENEAALRALEAEQQGLGSAGKEDVEAAAERLEQAAQHAVECRRKLEA
ALQVAERFTRIRELQEERTRRELQRQGLLSKEEEILLLERKLGQADEAEARLPALKAWRS
AEEAFKSRLTRAEGQEVLAAAAEQEAARAAAAAAAAQAALAAEEPALRQGADTYRRALEL
ESELGALRRELAALRERREEASRKLAELREGMARERELLAKGQKRQQELQQSLQPLGVRS
QERQSLQEAMQRLQGLHSAESQWDKAEKERRERAAALAAAQARLAEAEGRREQQEASRGQ
LIREAALHQEKLLATEEAARTAAESLEQHISSLEAALKGHELHRLSLGLAKELEAGQPCP
VCGSEHHPAPAVLQDNLEQQELESKLQQARVLSRRALEARHMFRGLREQDLVWLEQVFGD
GAFDTVNHPAAAGSEVSTTEVSSTDMSIPDEKALAELDAAFLALKSQSGELRRTAIQWQQ
SMQEVQQLCLKEAAGAEGERSWVEGLTAKAEELSGQLTALRQNWVQQFPDLGPEEVEKAY
RELLAKDAQAEEIRSRLEISVKFLDEKSASLQNLQETITGLDKELTQWNTQMEGKEELQR
EKERRLLEWTNGRAAAPLLAECERRLQELLAAVETSQRLHLTAAEKAQHEIKEAAITRQA
AESAREHYVTSSHLWEQSLTSSPFSSAAEVEGAALAPEEREISSSRVRAHRAEEAEVSLQ
LRNIEEKLDGASLSEEEWQVSQESLSACKSEDEMSLQARARAERDLEDLRHRHIRWMELE
AQRLEHASLQDHLSKLQTVLRGNAFVEYIAEEQLMQVCQSASQRLRFLSKQRYALEVDSG
GGFVIRDDGNGGVRRPVSTLSGGETFLTSLSLALALSAQIQLRGQYPLQFFFLDEGFGTL
DPELLDTVITSLERLHNDQLSVGIISHVPELRARLPRKLVVVPAEQGGGGSRILLEKM
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcctattttattaaaagttgcaggattgcagagttatagagaaatgcaggaaata
gattttgaaagtctgtgtgagaccgggctgtttgggatttttggacctacgggcagcggc
aagtccagtttgttggatgctattactttggcgatgtacgggaaagtagagcgcgccgtt
aacgggacacaggggattatgaatcactctgaggattcactcagcgtggcgtttaccttc
gagctcacttcctctgctggggcacatcgttatcgtgttgaacgtaagttcaagcggaca
ggtgagcaaacagtcagcaacaccattagccgtttcattgaagtcacacctgacggggat
aacgttatggcggataaactcgcagatgttacacgttgtgtggaagagcatattggactc
aaaatggatgacttcacgcgagcagttgtattgccgcaggggaaattcgccgaattctta
tcgcttcggggcgtagaccgccgacaaatgctgcagcgcctgttccatttggaacagtat
ggcgatcagcttgcgttgaagcttagccggcgggtgaaggagaatgaggctgcgctccgc
gcgctcgaagcggagcagcaggggcttggcagcgcaggcaaagaggatgtagaggcagcg
gcggagcgcctcgaacaagcagcccaacatgctgtggaatgccgccgcaagctggaggcg
gcgctgcaggtcgcggagcgtttcacgcgcattcgcgagctgcaagaggaacggacccgc
cgcgaattgcagcggcagggactgctctccaaggaggaggagattctcctccttgaacgg
aagctcggccaagctgacgaggccgaggctaggcttcccgcgctgaaagcatggcgaagc
gcggaagaagccttcaagagccgattgacccgcgcggagggtcaagaggtgctggccgcc
gctgccgagcaggaggcggcgcgtgccgctgcggccgcggctgctgcgcaggccgcgctt
gcggcggaagagccggccctccggcagggggccgacacctaccgccgcgcgctcgagctc
gagtccgagctcggcgccctgcggcgcgaactcgcggctctgcgcgagcgccgcgaagag
gcctcccgcaagctagcggagctgcgggagggcatggcccgggagcgtgagcttttggcc
aagggccaaaagcgccagcaagagctgcagcagagcttgcagccgctcggtgtccgctcc
caggagcggcagtctctgcaagaagcgatgcagagactgcaagggctgcactccgccgaa
tcccagtgggataaggcggagaaggagcgccgcgagcgtgccgctgcactcgcggctgcg
caggcgcgactcgcggaggccgagggccgtcgcgagcagcaggaagcttctcgcgggcag
ctgatccgcgaggcggcgctgcatcaagagaagctgctggcgacagaagaagctgcgcgc
accgcagcagaaagcctggagcaacatatcagttctttggaagcagccctcaaggggcat
gagttgcacagactgtcgcttggattggctaaagaattggaagcaggacaaccatgccct
gtatgtggcagcgaacaccacccggcccctgctgtattgcaggataacctagagcaacag
gaactggagtcaaagcttcaacaggctcgggtgttgtctagacgtgctttggaagcacgc
catatgttccgtggtttaagggagcaggacctggtttggctggagcaggtgtttggtgat
ggagcttttgatacggtaaatcatcctgcggcggcaggttcagaagtcagcactacagag
gtttcctctaccgatatgtccatcccagatgaaaaagctttggcagaacttgatgctgca
tttttagcattaaaaagccagtctggagaactgcgccgtacagcgatacaatggcagcaa
tcgatgcaggaagttcagcagctatgcctcaaagaagcagcgggtgccgaaggtgagcga
agctgggtagaaggccttaccgccaaagctgaggaactgagtggccaactaaccgctttg
cggcagaactgggtacagcagttccctgatttgggaccggaagaggtagaaaaagcttat
cgtgagctgttagccaaggatgctcaagctgaggaaattagatcccgactggaaatcagt
gtcaagtttctggatgagaaaagcgcttcgttacagaatcttcaggagaccatcaccgga
ctcgataaagagcttactcagtggaatacacagatggaaggcaaagaagaattgcagcgt
gaaaaagaacggcgtcttctagagtggactaatggccgcgctgctgccccacttctagca
gagtgtgagcgtcgtctgcaggaattgttagcagctgtggagaccagccaacgattacat
ctcacggcagcggaaaaagcgcagcatgagatcaaggaggcagcgattacccgccaggct
gcagaatctgctcgagagcattatgtgacttcaagccatctgtgggagcaaagcttaacc
tcttcaccgtttagttcggccgctgaggttgaaggagcagctctcgcacctgaagagcgg
gaaatttcatcttctcgggtacgtgcccatcgtgctgaagaagctgaagtctcattgcag
ctgcgcaatattgaagagaagcttgacggagccagcttaagtgaagaggaatggcaagtt
agccaggagagcttaagcgcgtgtaagtcagaggatgaaatgtctctgcaagcaagagcg
cgtgcagagcgagatctagaggatctgcggcatcggcatattcgctggatggagcttgaa
gcccagcggctagaacatgcttccctacaggatcatttgtccaaattgcagacggtttta
cgtggaaatgcttttgttgagtatattgcggaggaacaattgatgcaggtgtgccagtct
gcttctcagcggcttcgtttcctgagcaaacagcgttatgcgctggaggttgattcgggc
ggtggctttgtaatccgtgatgatggaaacggtggtgtaagaagaccggtctccacgctt
tccggcggagagacgttcttaacttccttgtcacttgcacttgctctttcggcacagatt
cagctgcgggggcagtatccattgcaatttttctttttggacgaaggttttggtacgctg
gatccggaattgctcgatacggtaattacctcactggaaagactgcataacgaccaactg
tctgtcggcattatcagccatgttccagagcttcgggcacgactgccacgcaagctggta
gtagtacctgctgaacagggtggagggggatctcggatccttttggaaaaaatgtga
DBGET
integrated database retrieval system
