Paenibacillus odorifer: PODO_23875
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Entry
PODO_23875 CDS
T03326
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pod
Paenibacillus odorifer
Pathway
pod03030
DNA replication
pod03430
Mismatch repair
pod03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PODO_23875
03430 Mismatch repair
PODO_23875
03440 Homologous recombination
PODO_23875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pod03032
]
PODO_23875
03400 DNA repair and recombination proteins [BR:
pod03400
]
PODO_23875
Enzymes [BR:
pod01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PODO_23875
DNA replication proteins [BR:
pod03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PODO_23875
DNA repair and recombination proteins [BR:
pod03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PODO_23875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
AIQ76046
UniProt:
A0A1R0YVQ0
LinkDB
All DBs
Position
complement(5298931..5299950)
Genome browser
AA seq
339 aa
AA seq
DB search
MDAKTAIKEIKQGKISPLYVLYGSEKFRMNEFTALLEEQLIAKEDRDFAVIPFDLSETPV
QAVVEEAETVPFMVERKLLLVRDASLFTAGKENAKLEHRIDLLSDYLQHPVDFSVIVFMV
NNDKLDERKKIVKTVKSVGTVLAFNPLGAEELLRWVEKGIRERGCVMAPGTAEILITNAG
TGLQGLSAEMDKLCLFAGKGGTVDAGAVESLVHRGTEQNVFTLVEDIANLRLDKALDTLY
ELLKQREEPIKIAALVARQFRIILQVKDLSAHSYSQGQIASQIGLHPYAVKLAGEQAHKF
SSERLRQILSALADLDYKMKTGAIDKVLGLELFMLRLGV
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggatgccaaaacggcgataaaagaaatcaaacaagggaagatctcaccgttgtatgtt
ttatatggcagtgagaaatttcgaatgaatgaattcacggcactgctggaagaacagctg
attgctaaagaggatcgtgatttcgcagttattccctttgatctctctgagacgccggtg
caggctgtggtagaagaagcggagactgtgccatttatggtagaacgtaaactattgctg
gtgcgggatgcctcgttatttacagcgggcaaagaaaatgccaaactggagcatcgtata
gatcttttaagtgactatttgcagcatcctgtagacttcagtgtgatcgtctttatggtg
aataatgataagctggatgagcgaaaaaaaattgtgaagactgtcaaatcagtgggcaca
gtattagcctttaatccgctgggagcagaagagctgctgcgctgggtggaaaaaggaatt
cgtgagcgtggttgtgtaatggcacctggcactgcagaaattcttataacgaatgcaggc
accggcttgcaaggtttatctgcagagatggacaagctttgtttattcgctggtaagggc
ggcactgtggatgcgggggccgtagagagtctggtacatcgtggaacagaacaaaatgtg
tttacgcttgttgaggatatcgctaatctgcgtcttgataaggcgcttgatacattatat
gagctgctgaagcagcgtgaggaaccgatcaagatcgcagcgctggttgcgcggcagttc
cgcattattttgcaggttaaggatttatcagcacatagttattcgcagggacagattgcg
tcacagatcggattgcatccttatgcggttaagcttgctggggagcaggcccataagttc
tccagtgaacgattgcggcaaatcttaagtgcattggcggatctggattataaaatgaaa
acaggggctatagacaaagtgctagggctggagctgttcatgctgcgtttaggtgtctga
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