Paenibacillus odorifer: PODO_23935
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Entry
PODO_23935 CDS
T03326
Name
(GenBank) CMP deaminase
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
pod
Paenibacillus odorifer
Pathway
pod00240
Pyrimidine metabolism
pod01100
Metabolic pathways
pod01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
pod00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
PODO_23935
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pod02044
]
PODO_23935
Enzymes [BR:
pod01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
PODO_23935
Secretion system [BR:
pod02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
PODO_23935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
Bd3614-deam
XOO_2897-deam
APOBEC_N
SNAD4
OTT_1508_deam
Motif
Other DBs
NCBI-ProteinID:
AIQ76058
LinkDB
All DBs
Position
complement(5313836..5314354)
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AA seq
172 aa
AA seq
DB search
MTTAYRKDWDTYFMDIACMVSTRSRCSRRHVGAVLVQGKKLLGTAYNGAPMGVPDCSEAG
CMLSEQYEMEIVDGVETMVKKQRCIRTIHAEQNLLLFTDRIDREGSTVYVTDEPCWTCAN
MLANSGIVEIVYYRPYRKDMEKVEAMMAAKGIVFRQLENYEPPSETMIKVAD
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgactactgcctatcgtaaagactgggatacttatttcatggacattgcctgtatggtc
tcaactcgttcacgctgctcacgacgacatgtaggtgctgtgctggtgcaaggcaaaaag
ctgcttggtaccgcgtacaatggggcgccaatgggcgtacctgattgctcagaggcaggt
tgtatgctctcggagcaatatgagatggagatcgtggatggcgtagagactatggtgaag
aaacagcgctgcattcgcacgattcatgcggaacagaatcttttgctattcacagaccgg
attgaccgggaaggcagcaccgtctatgtgacggatgagccttgctggacctgtgcaaat
atgctggctaatagcggtattgtggagattgtgtattatcgtccttaccgtaaggatatg
gaaaaggtagaagcaatgatggctgccaaaggcatcgtatttcgccaattggaaaattat
gagccaccaagtgaaacgatgattaaagtagcggattag
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