Paenibacillus odorifer: PODO_24040
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Entry
PODO_24040 CDS
T03326
Name
(GenBank) thiouridylase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
pod
Paenibacillus odorifer
Pathway
pod04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
pod00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
PODO_24040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pod03016
]
PODO_24040
Enzymes [BR:
pod01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
PODO_24040
Transfer RNA biogenesis [BR:
pod03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
PODO_24040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_C
tRNA_Me_trans_M
NAD_synthase
ATP_bind_3
Asn_synthase
ThiI
DUF7411
QueC
Arginosuc_synth
Motif
Other DBs
NCBI-ProteinID:
AIQ76078
LinkDB
All DBs
Position
5332647..5333768
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AA seq
373 aa
AA seq
DB search
MTKAKQDTRVVVGMSGGVDSSVTALLLKQQGYDVIGIFMKNWDDTDEFGVCTAESDAEDV
RRVCEQIDIPYYTVNFEKEYFDKVFSYFLDEYKAGRTPNPDVMCNREIKFGEFLNKALQL
GADYVATGHYARVIEEDGVYKLLRGVDNNKDQTYFLNALGQHQLSKTMFPIGHLPKPEVR
RIAEEAGLYTAKKKDSTGVCFIGERNFREFLSQYLPAQAGDMVDIVTGEIKGRHDGLMYY
TLGQRQGLGIGGSGNGEPWFVAEKDLSRNILYVVQGDKHHSLYSTSLIASGVNWIDGQEL
GQEPLKCTAKFRYRQPDQGVTLTAREDGTITVAFDVPQKAITPGQAVVFYLGEQCLGGGT
IEYAEKVVPSAQV
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagcaaaacaagacacccgtgtcgtcgtcggcatgtccggaggggtcgattcc
tccgtcacggcgcttctgctcaagcagcagggctatgacgtcatcggcatcttcatgaag
aactgggacgataccgacgaattcggagtatgtacggccgaaagcgatgcagaggatgtt
cgccgcgtatgcgagcagattgatattccttactataccgttaatttcgagaaggaatac
tttgataaggtattttcttattttctcgatgaatataaggccggccggacgccaaatcct
gacgtcatgtgcaaccgcgagattaagtttggagaatttttgaacaaagctcttcagctt
ggtgccgattatgtcgcaactggacattacgcacgtgttatagaagaagatggtgtgtac
aagctgctccgcggcgtagacaacaataaggatcaaacctatttcctgaatgcactgggg
caacatcaactctctaaaacaatgttccctattggacatctgccgaaacctgaagtgcgg
agaattgctgaagaagcaggactttacactgccaagaaaaaagatagcacaggcgtctgc
tttatcggcgagcgcaacttccgcgaattcctcagtcaatatctcccggcacaagctggc
gatatggttgacatagtaactggagagatcaaaggccgccacgacggacttatgtattac
acgttaggccaacgccaaggccttggtattggtggctctggcaacggcgaaccgtggttt
gtagctgagaaagaccttagccgcaacattctttatgtagtacaaggagacaagcaccat
agcctgtactccactagcctgattgcttccggtgttaactggattgacggccaagagctt
gggcaagagccgctgaaatgcaccgccaaattccggtatcgccagccagatcaaggcgtg
acccttacagcgcgtgaagatggaacaataactgtagcctttgatgttccacaaaaagct
atcacacctggtcaagccgttgtcttctatctcggcgagcaatgtctcggcggcggaacg
atagaatacgcggagaaggttgttccttcagcacaagtgtga
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