Paenibacillus odorifer: PODO_24055
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Entry
PODO_24055 CDS
T03326
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
pod
Paenibacillus odorifer
Pathway
pod02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pod00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PODO_24055
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pod02000
]
PODO_24055
Transporters [BR:
pod02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
PODO_24055
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
DUF4969
Motif
Other DBs
NCBI-ProteinID:
AIQ76081
LinkDB
All DBs
Position
complement(5340174..5342024)
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AA seq
616 aa
AA seq
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MRKAIRSKALLVSLMFVMLFALAACGSKNNNEAAESTAAPSASAPAATAEATAAPEAEDG
LYNIKDFSNVKTNQGEAIDGGTITFGLVSDSPFEGTLNWNFYSGDPDAQVLNWFDEGLLT
WDKDYVYTNDGAATYEVAEDGRTFTFTIRDNVNWQDGKPVTAEDWLFAHEVIGNPAYDGP
RYGSDFTNIEGMDEYHSGKAKTISGIKVLGDKKLQITYKQSTPSLLTGSVWIYPLAKHIF
GGMDVAKISSSPEVRQKPIGFGAFKVESIVPGESVVFVKNEDYWRGAPKLDKVILKVINP
TTIVQELKSGGVDLVDSFPIDQFPDNAKMSNVEFLGAVDRAYTYIGFKLGKWDAEKKVVA
TDPKAKMADVNLRKAMWAAVDNDTVGKKFYNGLRWNATTLIPPSHPEFHDASNPGVAYDP
EAAKKILDDAGYKLNGEFRTNPDGSELKINFISMTGGDIAEPLAQYYVQSWKAIGLNVTL
EMVEFNTFYDRIGQNGEDDPTVDVYQGAWGVGIDVDPSGLYGKDAIYNFPRYSSAENDRL
LAEGISEAAFDVDKRKEIYKEWQQFMVDEIPVFPTLYRAVIVPVNNRVLNYWAVGDGVEI
YYNDIAVSADKAAVAQ
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaagccattcgttcaaaagctttactagtttcattaatgtttgtaatgttgttc
gctcttgcggcttgcggctccaagaacaacaacgaagcggctgaatcaacagcagctcct
agcgccagcgcacctgcggcaactgcagaagcaacggccgcgcctgaggcagaagacgga
ctttataacattaaagattttagtaacgttaagactaaccaaggtgaagctattgacgga
gggacaattacatttggacttgtttccgatagtccatttgaaggtactttgaactggaac
ttctattctggagatccagatgctcaagttctgaactggtttgatgaaggtttgttaact
tgggataaagactatgtatatactaatgatggtgcggctacttatgaagttgcagaagat
ggacggacctttacctttacgattcgcgacaatgtaaactggcaggatggtaagccagta
acggctgaagactggttgttcgcccatgaagttattggtaatcctgcttatgatggtcct
cgttatggttctgacttcactaatattgaaggcatggatgagtaccattccggtaaagcc
aagaccatatccgggattaaagtgctgggtgataagaaactgcagattacttataagcaa
tctacaccttccttgttaacgggtagcgtatggatttatccattagccaaacatatcttt
ggcggcatggatgttgccaaaatctcctcttcccctgaagtccgccaaaagccaattggc
ttcggagcttttaaagtagagagcatcgttcctggtgagtctgtagtatttgttaagaat
gaagattactggcgcggagccccaaaactggataaagtaattttgaaggttatcaaccca
acaacgattgtacaagaactgaaatctggcggagttgacttggtggattccttccctatt
gatcaattcccggataatgcaaagatgtcaaacgttgaattcctgggtgcggttgatcgt
gcttatacgtatataggctttaagcttggtaaatgggatgcagagaaaaaggttgttgca
acagatcctaaagctaaaatggcggatgtaaatctgcgtaaagccatgtgggctgccgta
gataatgatactgtcggtaagaagttttataatggacttcgctggaatgcgactacgttg
atcccaccttcccatcctgaattccatgatgcttccaatccaggtgtagcttatgatcca
gaagcagctaagaagatcctggatgacgctggttacaaactaaacggtgaatttagaacg
aatccagatggcagcgagctgaagattaatttcatttcgatgactggtggagacattgct
gagccgctggctcaatattatgtacaatcctggaaagcgattggtctgaatgtaactttg
gaaatggtagagtttaataccttctatgatcgcataggtcaaaatggtgaggatgatcct
actgttgatgtgtaccaaggcgcttggggtgtagggattgacgttgacccatcaggtctg
tatggcaaagatgcaatctataacttcccgcgttactcgagtgcagagaacgatcgtttg
ctcgccgaagggatctccgaggctgcatttgatgtagacaaacgtaaagaaatctataaa
gagtggcaacaatttatggttgatgagattccagtattcccaacactttatcgtgctgta
atagtgccggttaataaccgcgtcctgaattattgggctgttggtgatggagttgaaatc
tattataacgacattgcggtttctgcagataaagctgcggtagctcagtaa
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