Paenibacillus odorifer: PODO_24615
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Entry
PODO_24615 CDS
T03326
Name
(GenBank) HemD protein
KO
K13542
uroporphyrinogen III methyltransferase / synthase [EC:
2.1.1.107
4.2.1.75
]
Organism
pod
Paenibacillus odorifer
Pathway
pod00860
Porphyrin metabolism
pod01100
Metabolic pathways
pod01110
Biosynthesis of secondary metabolites
pod01120
Microbial metabolism in diverse environments
pod01240
Biosynthesis of cofactors
Module
pod_M00926
Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme
Brite
KEGG Orthology (KO) [BR:
pod00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
PODO_24615
Enzymes [BR:
pod01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.107 uroporphyrinogen-III C-methyltransferase
PODO_24615
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.75 uroporphyrinogen-III synthase
PODO_24615
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEM4
TP_methylase
DAHP_snth_FXD
Radical_SAM
DUF834
Motif
Other DBs
NCBI-ProteinID:
AIQ76173
LinkDB
All DBs
Position
complement(5463045..5464592)
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AA seq
515 aa
AA seq
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MTGKVYLVGAGPGDAKLITVKGLECIQKSDVLVYDRLASPRLLKCMKPGGEKIYVGKLPD
RHTMKQEQINQLLVDLALQGKTVVRLKGGDPTIFGRVGEEAELLRKNGIYYEIVPGITSA
ISVPAYAGIPVTHRDHASSLSIITGHESPDKLDHSIHWDKVTNATGTLVFLMGVAKIGYI
SAQLIKHGRPPETPVALVRWGTRADQETLTGTLADIEAKVKAADFQPPAVIVVGDVVLQR
EQLKWVEAMPLFGKRIVVTRARSQASELVDRIEELGGEPYEFPVIETIMPEGAEKKAKIA
AAFGALESYDWVFFTSPNGVEFFWRHLAELGADIRGLHRARIAAVGPGTAAALAQRGVIA
EELPAKFQAEGLIETFGPQLLPGQNVLLPRGDLARDWLPDKLRELGLQVTDVDTYETVVT
GEDDDELLKLLEEGRVHAVTFTSSSTVRNFIHILKRMGLEDPLPLLANVKIACIGPLTEQ
TAVDAGLTPGLLPEEATIDGLVQELCRWNAETQLQ
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
ttgacggggaaggtttatttggtaggtgcaggtcccggggacgcaaagctgattactgtg
aaaggcctcgagtgtatccaaaaaagcgacgtactggtgtatgatcgcttggcaagtcct
agattgctgaaatgcatgaaacccggcggggagaagatttatgtaggcaagctgccggat
cgccacacgatgaagcaagaacagattaatcaattgttagttgatttggctttacagggg
aaaacagtggtgcggcttaagggtggggaccctacgatttttggccgagtgggtgaagaa
gcggagctgctgcgcaaaaatgggatctattacgaaatcgtaccaggcatcacgtcagcg
atcagtgtacctgcctatgcgggtatacctgttacgcaccgcgatcatgcctcttccctg
tcgattatcaccgggcatgagagtccggataaactggatcattccatacattgggataaa
gtaacgaacgccacaggcacgttagtgtttctgatgggcgtagctaaaataggttatatc
agcgctcagctgatcaagcacgggcggccgccagaaacaccagtggcacttgtgcgctgg
ggcacccgcgcggatcaggagacgctgacgggaaccctcgccgatattgaggcgaaggtg
aaggcggcggattttcagccgccggcagtcatcgtcgtcggcgacgtggtgctgcagcgt
gagcagctgaagtgggtcgaggcgatgccgttattcggcaaacgcatcgtggtgacacgg
gctcgcagccaagcaagcgagctggtggatagaattgaagaactcggcggggaaccctac
gagttcccggtgatcgagacgatcatgccggaaggggcagagaagaaggcgaagattgca
gcggcgtttggcgcgctggaatcgtacgactgggtattcttcactagcccgaacggcgtg
gagtttttttggcgccacttggcggagctgggggcggacattcgcgggctacaccgcgcg
cgtattgcagcggtggggccaggcacagccgccgcgctggcgcagcgcggggtgatcgct
gaggaacttccggcgaagtttcaggcggaaggtctgattgagacgttcggtccccagctg
ctgccggggcagaacgtgcttttgccgcgcggcgatctggcgcgggactggctgccggac
aagctgagagagcttggcctacaggtgacagacgtggatacttatgagacggttgtcact
ggtgaggatgacgacgagctgctgaagctgctagaggaaggtcgcgtacatgcggtaacc
ttcaccagctcgtcaaccgtgcgtaatttcatacacatcctgaaacggatgggacttgaa
gatccgctcccgctacttgcaaacgtgaaaatcgcctgcatcggcccgttaacggagcag
actgcggtagacgcgggactgacaccgggactcttgcctgaagaggcaaccatagatggt
ttggtgcaggagctctgccgctggaatgcggagactcagctgcagtag
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