Paenibacillus odorifer: PODO_25305
Help
Entry
PODO_25305 CDS
T03326
Name
(GenBank) ABC transporter ATP-binding protein
KO
K14699
ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
Organism
pod
Paenibacillus odorifer
Pathway
pod02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pod00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PODO_25305
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pod02000
]
PODO_25305
Transporters [BR:
pod02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
PODO_25305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_21
AAA_29
AAA_22
AAA_23
AAA_15
AAA_16
nSTAND1
AAA_30
Rad17
AAA_5
nSTAND_NTPase5
AAA_25
Zeta_toxin
AAA_18
RsgA_GTPase
Cytidylate_kin
ORC-CDC6-like
Motif
Other DBs
NCBI-ProteinID:
AIQ76295
LinkDB
All DBs
Position
complement(5630747..5632486)
Genome browser
AA seq
579 aa
AA seq
DB search
MKVLHNITAGKPQQLLKPVLFSLLANLVSVLPFALVIEAVRLIFAPYITVGAELQTERLW
WICAGLVAVMVLMFLSEIPAYRTAYRGAYNVAAQGRAELAEHLRKLPLGYLTRRDPGDLA
NMMMGDFTLVETGISHLLPQLAGAFVLPIFALAGLLFLDWRMAISMFVALPVALLIMYIS
GKLRRRLGADHMKAKLNAANRLQEYLNGIRVMKAYNLTGERFVRLDNSFKTLMKESVKLE
GMFGPVILTAMALLRAGLTLMIYVGVHLLLGGELGILQLAVFLIVGTRIYDPLTTALANY
AEFRYNEQAGERIVDLLRQPVMTGATSPLPKSSTIRFDNVTFSYGGEPVLKNLSLEMPQG
SLTAIVGPSGSGKSTVLRLISRFYDPEKGSVLLGGRNIKEIDPEHLLGSVSVVFQDVYLF
QDTIGNNIAFGRPGASQRDIQQAAEMAHCHGFIMKLPLGYDTPVGEGGSTLSGGEKQRIS
IARAILKNAPIVLLDEATASLDPQNEAEIQKGIDALITGRTVIVIAHRLKTIRGADNIIV
LEDGQLVEQGRHDALLLRGGLYDRLWKLQQQSVGFRITS
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtattgcataatattactgccggcaaaccgcagcagttgctgaagcctgtactt
ttttccttgctggctaatctagttagtgtgcttccgttcgcgcttgtaattgaggcggtg
cggttgatttttgctccttatattactgtgggcgcagaacttcagacagaacgcctttgg
tggatctgcgcagggcttgtcgccgtcatggtgctgatgttcctgagtgagattcccgcc
tatcgtaccgcttaccgcggggcatacaatgttgctgcacagggacgtgcggaattagca
gaacatctgcggaagcttccgctgggttacctgactcgccgggacccaggtgatttagcc
aatatgatgatgggtgatttcacgctcgttgagacgggcatttcacatctgctgccacag
cttgcgggggcttttgtactgccgatatttgcacttgctggtttactgtttctggactgg
cggatggcgatttccatgttcgtagcgctgccggttgctcttctgatcatgtatatatcg
ggcaagcttcggcggagactcggagcggatcatatgaaggccaagctgaacgctgcgaac
cgattgcaagaatacttgaacggcatacgggtgatgaaggcctataatctgacaggagaa
cgatttgtccgtctggataactcttttaaaactttgatgaaggaaagtgtgaagctggaa
gggatgttcggtccggttattctaaccgctatggctcttctccgtgcggggctgacctta
atgatatacgtaggtgttcatctattattaggcggggagctcggtattttgcagttggca
gtattccttattgtcggcacacgaatctatgatccattgaccacggcgctagccaattat
gccgaattccgctacaacgaacaagcgggtgaacgtatagtagacctgctgcgccagccg
gtaatgacaggtgctacgagtcctcttcctaaaagcagcaccattaggtttgacaatgta
accttcagctatggaggagagcctgttctcaaaaatttaagtctggaaatgccgcaaggt
tcactgactgcaattgtgggtccgtcaggcagcggcaagagtacagtgctgcgcctgatc
tcacgtttctatgatcctgaaaaagggagtgttctgctaggtgggcgcaacatcaaggag
attgatccagaacatctgctaggatccgtatcggtggtgtttcaggatgtgtacctgttt
caagataccattgggaacaatattgcttttgggcggccgggggcgtcgcagcgggatatt
cagcaggcagcggaaatggctcactgccatggtttcatcatgaaattaccgcttggttat
gatacgccggtaggcgaaggcggaagcacgctctccggaggggagaagcagcggatctcc
attgcccgtgcgattctcaagaacgctccaattgtgctgttggatgaagctactgcatcg
cttgacccgcagaatgaggccgaaatccagaaaggaattgatgcgttgattacgggcagg
accgtcattgttatcgctcaccggctgaaaaccatacgcggtgcggacaacattatcgta
ctggaagacggtcagctggtagagcagggacgacatgatgccttactgctgcgcggcgga
ttgtacgaccggctctggaagctgcaacagcagtccgttggattccgcatcacatcttag
DBGET
integrated database retrieval system
