Paenibacillus odorifer: PODO_25310
Help
Entry
PODO_25310 CDS
T03326
Name
(GenBank) ABC transporter ATP-binding protein
KO
K14698
ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
Organism
pod
Paenibacillus odorifer
Pathway
pod02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pod00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PODO_25310
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pod02000
]
PODO_25310
Transporters [BR:
pod02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
PODO_25310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA
AAA_29
AAA_16
AAA_22
Zeta_toxin
RsgA_GTPase
AAA_30
DEAD
AAA_33
nSTAND1
IstB_IS21
AAA_25
AAA_24
AAA_21
Motif
Other DBs
NCBI-ProteinID:
AIQ76296
LinkDB
All DBs
Position
complement(5632483..5634264)
Genome browser
AA seq
593 aa
AA seq
DB search
MPRLLEIAGEKRGLLLLSGILSSVSAVLMLIPFLSVYFILAELLRHASSPGQVDGTYMIR
WGWIALGGLIGGLVTSYCGIMCSHIAAFRIQYNLRVRMTEHLGRLPLGFLNGTSTGVVKK
TLEQNVDKVENFVAHQLPDLVSVLASTVLMIVAMFWLSPPLAVACLLPIIIGLGVQSALM
MSSRGKASVKQYHDSLEQINTSAVQYVRGMPAVKVFGQTVHSFRKFYSDMTSYRDYCLEY
TDRYQTGYILFKTLLASPFTFILPVGIFMLSGRPDSMSFALVLLFFLIMAPGVSSPLYKL
LLLASSTRDIGEGVERMDRLLAQQPVSEIAEPLSPHTFDVEFVDVTFSYSEDAGTAAALS
EVSFRAEQGKVTALVGPSGSGKSTVASLVPRFWDPQVGAIRIGGVDIRHMAIHELMNTVA
FVFQETFLFYDTLYENIAVGKPGATLEEVQAAARAAQCDEFITRLPQGYDTLIGEGGVYL
SGGEEQRIAVARAILKNAPVLVLDEATAFADPENEFHMQLALTELMRGKTVIVIAHRLSS
IREAAQILVLRDGEIVERGEHAGLIEADGLYAKMWHAYSDAGDWHMEKGGDQL
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgccaaggctgctggagatcgccggagagaagcgaggtttgctgctcttgtccggaata
ttgtcatctgtcagcgctgtattaatgctgattccgtttttgtctgtttatttcattttg
gcagagctgctgcgccatgcttcatcgcctggacaggtcgacggtacgtatatgatccgc
tgggggtggattgcacttggagggttaatcggagggctggtgacttcgtattgtggtatt
atgtgctcgcatattgcggcttttcgaattcaatataatttgcgtgtgcgaatgaccgag
catttgggcagattgccgctcggtttcctgaatgggacatcaactggcgtggtcaagaaa
acgctagagcagaatgtcgacaaggtggaaaatttcgtagcgcatcagcttcccgattta
gtcagcgtgctggcttctacggtgctgatgatcgtggcgatgttttggcttagtccgccg
ttggcggtagcttgcctgctgccgataattataggattaggtgtgcagtcagcgcttatg
atgagcagcagaggcaaggccagtgtgaagcagtatcatgattcgttggagcagatcaat
acttcggcggtgcagtatgtacgggggatgccggcggttaaggtgttcgggcagacggtg
cattctttcagaaagttctacagtgatatgaccagctaccgcgattattgtctggagtat
acggaccgttatcaaacaggttatatcttattcaaaacattgctggcgtcaccgtttacc
tttattttgccggtgggcatcttcatgctaagcggccgaccggattccatgtcttttgcg
cttgtgctgctgttctttctaattatggcgcccggcgtttcatctccgctctacaagcta
cttctgctggcttcaagcactcgggatattggcgaaggcgtggagcggatggaccgtctc
ttggcacagcagcctgtatcagaaatagcagaaccgctatccccgcatacttttgacgtt
gaatttgtggatgtaaccttctcctacagtgaagatgcagggactgcagcggcgctcagc
gaagtctcattccgtgcagaacaagggaaggttacagcgctggtagggccgtcaggttcg
ggaaaatcgacggtggccagcttggtgccgcggttctgggacccgcaagtgggtgcgatc
cgtatcggtggagtcgatattcgccatatggcaatccatgaattaatgaatacagttgct
tttgtatttcaggaaaccttcctgttctatgacactttgtatgagaatattgctgtcggc
aaaccgggagcgactctggaggaagtccaggctgcagccagagcggcacaatgcgacgag
ttcattactcggctgccgcagggatacgatacgttaattggtgaaggcggtgtctatctc
tcgggtggtgaggagcagcgcattgcggtagctcgggctattctcaaaaatgcaccagtg
ctcgtgctcgacgaagcgactgcttttgccgacccggaaaatgagtttcatatgcagtta
gcacttacggagcttatgcgcggcaagacggttattgtcattgctcaccgactctcctct
atacgtgaagctgcacaaattctggtgctgagggatggagaaatcgtggaacgtggagag
cacgcaggtttgattgaggcggacgggctttacgccaaaatgtggcatgcctacagtgac
gccggagattggcatatggaaaaaggaggggatcagctatga
DBGET
integrated database retrieval system
