Paenibacillus odorifer: PODO_25635
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Entry
PODO_25635 CDS
T03326
Symbol
sdhB
Name
(GenBank) succinate dehydrogenase
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
pod
Paenibacillus odorifer
Pathway
pod00020
Citrate cycle (TCA cycle)
pod00190
Oxidative phosphorylation
pod00650
Butanoate metabolism
pod00720
Other carbon fixation pathways
pod01100
Metabolic pathways
pod01110
Biosynthesis of secondary metabolites
pod01120
Microbial metabolism in diverse environments
pod01200
Carbon metabolism
Module
pod_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pod_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pod00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PODO_25635 (sdhB)
00650 Butanoate metabolism
PODO_25635 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
PODO_25635 (sdhB)
00720 Other carbon fixation pathways
PODO_25635 (sdhB)
Enzymes [BR:
pod01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
PODO_25635 (sdhB)
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Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_8
Fer4_7
Fer4_9
Fer4_10
Fer4_17
Fer4_2
Fer4
Fer4_13
Fer4_4
Fer4_21
Fer4_3
Fer4_15
Fer4_6
Motif
Other DBs
NCBI-ProteinID:
AIQ76347
UniProt:
A0A1R0YW14
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Position
complement(5710616..5711380)
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AA seq
254 aa
AA seq
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MAETAAAPKNVKFIITRQDDPQSSSYVEEFELPYRPGMNVISALMEIQRNPVNAKGDSTV
PVCWDSNCLEEVCGACSMVINGKPRQACAALIDNLEQPVRIEPMKTFPVVRDLVIDRTRM
FNALKRVKAWIPIDGTYDLGPGPRMPEKKRQWAYELSKCMTCGVCLEACPNVNEKTDFIG
PAAISQVRLFNAHPTGEMNADERLDALMEDGGIDGCGNSQNCVRACPKGIPLTTSIAEIN
KQTTKHMFKRWLGV
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaacagctgcagctcccaaaaacgtaaagtttatcatcacccgccaggacgat
ccacaaagttcatcgtatgtcgaggaatttgaacttccttatcgtccaggtatgaatgtg
atcagtgctttgatggaaattcagcgtaaccctgtgaatgccaaaggtgacagcacagtt
cccgtatgctgggattccaactgtttagaagaagtgtgcggagcttgctccatggtgatt
aatggcaaaccccgccaagcctgcgctgcacttatagacaatctggagcagcctgtacgc
attgagcctatgaagacatttccggtggtgcgtgacttagtcattgaccgtacccggatg
ttcaatgcgctaaaaagggtgaaagcatggattccgattgacggtacgtacgatcttgga
ccgggaccgcggatgccggagaaaaaacggcagtgggcctatgaattatccaaatgtatg
acctgtggcgtatgtttggaggcttgtccgaatgtcaacgaaaagacggatttcatcgga
ccggcagccatttctcaagtacgtctgttcaatgctcaccctacaggtgaaatgaacgct
gacgaaagattggacgctcttatggaggatggcgggatcgatggctgtggtaactcacag
aactgtgtacgcgcttgtccaaaggggattcctcttacgacatctattgcagaaataaac
aagcaaacaacgaagcatatgttcaaacgttggttaggtgtgtaa
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