Paenibacillus odorifer: PODO_25640
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Entry
PODO_25640 CDS
T03326
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
pod
Paenibacillus odorifer
Pathway
pod00020
Citrate cycle (TCA cycle)
pod00190
Oxidative phosphorylation
pod00650
Butanoate metabolism
pod00720
Other carbon fixation pathways
pod01100
Metabolic pathways
pod01110
Biosynthesis of secondary metabolites
pod01120
Microbial metabolism in diverse environments
pod01200
Carbon metabolism
Module
pod_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pod_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pod00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PODO_25640 (sdhA)
00650 Butanoate metabolism
PODO_25640 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
PODO_25640 (sdhA)
00720 Other carbon fixation pathways
PODO_25640 (sdhA)
Enzymes [BR:
pod01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
PODO_25640 (sdhA)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Pyr_redox_2
GIDA
FAD_oxidored
NAD_binding_8
AlaDh_PNT_C
DAO
Thi4
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
AIQ76348
UniProt:
A0A1R0WZ95
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Position
complement(5711456..5713198)
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AA seq
580 aa
AA seq
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MATSDIIIVGGGLAGLMATIKAAEAGAHVHLFSLVPVKRSHSVCAQGGINGAVNTKGEGD
SPWEHFDDTVYGGDFLANQPPVKAMCEAAPGIIHLMDRMGVMFNRTPEGLLDFRRFGGTK
RHRTAFAGATTGQQLLYALDEQVRRWESEGLVTKRENWEFLSAIIDDEGVCRGISAQNLK
TMEIETFPADAVILASGGPGIIFGKTTNSVINTGTAASAVYQQGVHYANGEFIQIHPTAI
PGDDKLRLMSESARGEGGRIWTYKDGKPWYFLEEKYPSYGNLVPRDIATREIFNVCVDQG
LGINGENMVYLDLSHKDPKELDVKLGGIIEIYEKFMGDDPRKIPMKIFPAVHYSMGGMWV
DYNQMTNVPGLFAAGECEYQYHGANRLGANSLVSAIYGGMVAGPKAVEYIKGLKKSSQDI
SSSVFDSFHKKQTDKYESLLAMSGTENAYVIHKELGEWMTANMTVVRHNPKLEATIGKIK
ELKERYRKINMNDASRWNNQGVAFTRQLWNMLELSEAMTLGALMRNESRGAHYKPEFPNR
NDEEFLKTTKAAWTAEGPQISYDEVDVSLIPPRVRDYSKD
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggcaacatccgatatcattatcgtgggcggcggtctggccggcttgatggctaccatc
aaggcagcggaagctggtgcgcatgtccatttattctcattagttcctgtaaaaagatca
cactccgtatgcgcgcaaggcggcatcaatggcgcggtaaatacaaaaggtgagggcgac
tccccttgggagcattttgacgacactgtctatggcggtgactttttggcgaatcagccg
ccggttaaggcgatgtgtgaagctgcgccaggtatcattcaccttatggaccggatgggc
gttatgttcaaccgcacaccggaaggtctgctcgatttccgtcgtttcggcggaacgaag
cggcaccgtacagcttttgccggcgcgacaacaggccaacagctgctgtacgcgttggat
gagcaggtgcgccgctgggaatctgaaggtctcgtaactaaacgcgagaactgggagttc
ctttcggctatcatcgacgacgaaggtgtatgccgcggcatcagtgcccagaatcttaag
acgatggagattgagacttttcctgcggatgctgttattttggcaagcggcgggccgggt
attatttttggcaaaacaacgaactccgttattaatacagggacagctgcaagtgcggtg
taccaacagggtgtacattatgccaacggagaatttatccagattcacccaaccgctatt
ccgggagatgacaagctccgcctgatgtcggaatcggcacgtggcgagggcggccgtatc
tggacttataaagacgggaaaccgtggtatttcctcgaagaaaaatatccgtcctacggt
aacttggtgccgcgcgatattgctacacgtgaaatttttaatgtgtgtgtggatcaaggg
ctgggcattaatggcgagaacatggtgtatttggacctctctcacaaggatccgaaagag
ctggacgtgaagcttggcgggattattgaaatttacgaaaaattcatgggggatgatccc
cgtaaaataccaatgaagatcttcccggctgtacactattctatgggcggcatgtgggtt
gattacaatcaaatgacgaacgttcctggtctttttgcagccggagaatgtgaatatcaa
tatcatggagcgaaccgtctaggcgccaactcactggtatctgctatttacggcggtatg
gtcgcaggaccaaaggctgttgaatacattaaaggcctgaagaaatcatcgcaggatatc
tcttcttccgtattcgatagcttccacaaaaagcaaacggacaaatatgaatctctgtta
gcgatgtcaggtacagagaatgcttatgtgattcacaaggaactgggcgaatggatgacc
gccaatatgaccgtggtgcggcacaatccgaagctggaagcgaccattggcaaaatcaaa
gagcttaaggagcgttatcgcaagatcaatatgaatgatgcatcgcgctggaataaccaa
ggtgtggccttcactcgccagctctggaatatgctggagctgtccgaagcgatgacactt
ggagcgcttatgcggaatgagagccgtggtgcacattacaaaccggaattcccaaatcgt
aatgatgaggagttcttgaagaccacaaaagcagcctggactgcagagggtccacaaatc
tcctacgatgaagtggatgtctcgctgattcctccacgggtacgcgattattcgaaggat
taa
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