KEGG   Paenibacillus odorifer: PODO_26750
Entry
PODO_26750        CDS       T03326                                 
Name
(GenBank) RNA polymerase sigma70
  KO
K03090  RNA polymerase sigma-B factor
Organism
pod  Paenibacillus odorifer
Brite
KEGG Orthology (KO) [BR:pod00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pod03021]
    PODO_26750
Transcription machinery [BR:pod03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     PODO_26750
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r3 Sigma70_r2 Sigma70_r4_2 HTH_23 GerE Sigma70_ECF HTH_50 HTH_38 HTH_Tnp_ISL3 HTH_28 KORA TnsD DUF1492 Cyclophil_like2 HTH_24 HTH_29 MarR HTH_10 MarR_2 HTH_31 Phage_antitermQ HTH_3 DUF7343
Other DBs
NCBI-ProteinID: AIQ76530
UniProt: A0A1R0X5X0
LinkDB
Position
complement(5957787..5958557)
AA seq 256 aa
MSDKVTPPESMNEAVTQIWEYQQTKDNERATVLIQKYEPMVKMAAGKISRNRPDLYEDLY
QVGQMALIRLLQQYDISLGIPFEPYAMKSMIGHMKNFLRDKSWYIQVPRRIKEKGALVQH
AIDELTVKLERSPAVDEIAHYLDLSVEETVEVLAGRECYHYVSLDSPLSQEETGATLGEL
ISSDANDYETVEKRMDLQQALGQLKEQEQQVLLLAFQDGQSQRAIAQKLGVSQMSVSRIQ
KRATEKLKQIMANSSY
NT seq 771 nt   +upstreamnt  +downstreamnt
atgagtgataaggtgactccccccgagtccatgaatgaagcagtcacccaaatttgggaa
tatcagcagactaaggataatgaacgcgcaacagtgctgatacagaaatatgagcctatg
gtaaaaatggctgctggaaaaatttctcgcaaccgccccgacttgtatgaggatttatat
caggtcgggcaaatggcgctcatccggttattacagcaatatgatattagccttggaatc
ccttttgagccctatgcgatgaaaagcatgattggacatatgaagaatttcctacgtgat
aaatcttggtacatacaggtacctagacggattaaagaaaagggggcacttgttcaacac
gcgattgacgaactaacagtgaagctggaacgttcgcctgcggtggatgagattgctcat
tatcttgatttgtctgttgaagaaactgtagaagtactggcgggcagagaatgttatcat
tacgtctccctagactcgcccctttctcaagaggagacaggagctacgctaggcgagctg
atcagctctgacgcaaatgattacgagaccgtagagaaacgtatggatttgcaacaagca
ctaggtcaattgaaggaacaggagcagcaggtgctgctgttagcgttccaagatggacaa
tcccagcgggcgatcgcccagaagctgggggtatcacagatgagcgtttcacgcatacag
aagcgggccactgagaagttaaagcagattatggccaactcttcctattga

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