Paenibacillus odorifer: PODO_27660
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Entry
PODO_27660 CDS
T03326
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pod
Paenibacillus odorifer
Brite
KEGG Orthology (KO) [BR:
pod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pod03016
]
PODO_27660
Enzymes [BR:
pod01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
PODO_27660
Transfer RNA biogenesis [BR:
pod03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PODO_27660
Prokaryotic type
PODO_27660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
AIQ76678
UniProt:
A0A1R0X1F8
LinkDB
All DBs
Position
complement(6143279..6144061)
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AA seq
260 aa
AA seq
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MRNLLMKVNYDGTNYDGFQTQPQGNTIQDRLEQAILHLTGEKLKITASGRTDAGVHAYGQ
PFNFTTSSRIPTERWCLALNARLPQDIVVTEAREVPLTFHSRRGAKRKTYRYTINGNRFP
DPFQRRWQLHHPVKLDIPAMQQGLTQIIGTHDFTSFASRRSTKTSHVRTIFEAHMEVDRS
MCRPSSSDQGVIHTYITGSGFLQHMVRIIMGTLIHVGEGKIPADKVAEILAACDRSHAGP
TAVAMGLALWSVEYDEIESE
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaatctattgatgaaggtcaattatgacggaacgaattatgatggctttcagacc
cagcctcagggcaatacgattcaggatcggctggagcaagccatactccatctgactggt
gagaagctgaagattactgcttcaggccgcacagatgccggagtacatgcctatggccag
ccttttaactttacaacctcctctcgaatcccaactgaacgttggtgtctagcgcttaat
gcccggctgccacaagacatcgtggttacagaggctagggaagttccgctaacgtttcac
tctcgtagaggggctaagcgtaaaacttaccgatacacgattaatggcaacaggtttcca
gatccgtttcaacggcgctggcagcttcaccatccagtgaagttggatattcctgcgatg
cagcaaggcttaacgcaaattatagggacacatgacttcacttcgtttgcatcacgacgg
tctacgaagacttctcatgtacgaacgatctttgaagctcatatggaagtagatcgcagt
atgtgccgaccctcttcatcagatcaaggagttatccatacttatataacgggtagtgga
tttcttcagcacatggttcgcattattatggggactttgatccatgtgggggaaggtaaa
atacctgctgataaggttgctgaaatattggcagcatgtgatcgatcacatgctggtcca
acagctgtggccatggggttagctttgtggagtgttgaatatgacgagattgaaagtgaa
tag
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integrated database retrieval system
