Paenibacillus odorifer: PODO_27955
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Entry
PODO_27955 CDS
T03326
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pod
Paenibacillus odorifer
Brite
KEGG Orthology (KO) [BR:
pod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pod03400
]
PODO_27955
DNA repair and recombination proteins [BR:
pod03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PODO_27955
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DUF7125
DnaB_C
AAA_16
nSTAND_NTPase5
AAA_22
Lon_C
NTPase_1
KdpD
nSTAND3
AAA_24
AAA_14
AAA_5
DAP3
AAA_30
NACHT
NPHP3_N
AAA
Glyco_transf_N
SLFN-g3_helicase
ATPase_2
CbiA
MeaB
Fer4_NifH
Rad51
DUF815
AAA_31
ABC_tran
KTI12
HypA
Motif
Other DBs
NCBI-ProteinID:
AIQ76737
UniProt:
A0A1R0YRV5
LinkDB
All DBs
Position
complement(6189733..6191100)
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AA seq
455 aa
AA seq
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MAKAKTKFFCTDCGYESPKWFGKCPGCQAWNSMVEETESVVKTQGMNAPIFHSKEKAQSI
ISIESDKEPRILTGIGELNRVLGGGIVPGSLVLVGGDPGIGKSTLLLQTSHALTTQGLRV
LYISGEESVRQTKLRADRLDALSTELYVLCETNMESIEEAIEQIQPQFLVIDSIQTVFMP
EVTSAPGSVTQVRECTTRFMRIAKIRGIATVLVGHVTKEGAIAGPRMLEHMVDCVLYFEG
ERHHTYRLLRAVKNRFGSTNEIGIFEMGEAGLTEVENPSELFLSERPLGVAGSTVVASME
GTRPVLVELQALVAATHFPSPRRMCTGMDHQRMALIIAVLEKRMGMFLQNQDAYLNVAGG
VKLDEPAIDLAVAISIASSFRDISTKPYDVFFGEVGLTGEVRGVSRAEMRVKEAAKLGFR
RVIMPEKSMKGWKHPQDIQIIGVSTVADALSVALD
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagcaaaaacaaaatttttttgcaccgactgtggatacgaatcgccaaaatgg
ttcgggaaatgcccagggtgccaggcttggaactccatggtggaggaaacggaaagcgta
gtcaaaacacagggaatgaatgcccctatttttcatagtaaagaaaaggcacagtcgatc
ataagtatagaaagtgacaaggaaccgcgcatactgacaggtataggtgagcttaaccgt
gttctcggtggggggatcgtaccaggatcgctggtactagtagggggagacccaggaatc
ggtaaatctacgctcttattacagacctcgcatgcccttacaacacagggattgcgagta
ctgtatatctcgggcgaagaatcggtaaggcaaactaagctgcgcgcggatcgcctcgat
gcgttgtcaacggagctttatgtactatgtgagacaaatatggaaagcatagaagaagcg
atcgaacaaatccagccacaatttcttgtcatcgattctattcagaccgtatttatgcca
gaagtaacgagtgcgccaggcagcgtgacccaggttcgggagtgtacgacaagatttatg
cgtatcgctaagattcgtggaattgcaacagttctcgttggtcatgttaccaaggaaggg
gctattgctggaccacggatgcttgaacatatggtggactgcgtgctgtattttgagggt
gagcggcatcatacgtatagacttttgcgggctgtaaaaaaccgctttggctctacgaat
gaaatcggcattttcgaaatgggtgaagcggggcttaccgaagtagagaatccatcggag
ctctttttatcggaacgtccgcttggcgtggctggttctactgtggtggcaagtatggag
ggaactagacctgtgcttgtagaacttcaggcacttgttgctgccacccacttcccttcc
ccacggcgaatgtgcacaggcatggatcaccagcggatggcacttattatcgctgtactc
gagaaacggatgggcatgttcctgcagaatcaggatgcatacctgaatgttgccggggga
gtaaagctggatgaaccggcgattgatctagctgtagctattagtatcgcctccagtttt
cgtgatatttcaacaaaaccttacgacgttttcttcggagaagtaggacttaccggtgag
gtaagaggcgtttcgcgcgcggaaatgcgcgttaaggaggccgcaaagcttggcttccgg
cgggtgattatgcctgagaagagcatgaagggatggaagcacccgcaagatatccagatt
attggcgtcagtaccgtagcagatgcactatcggtcgcgttagattag
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