Paenibacillus odorifer: PODO_28035
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Entry
PODO_28035 CDS
T03326
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pod
Paenibacillus odorifer
Pathway
pod03420
Nucleotide excision repair
pod03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PODO_28035
03430 Mismatch repair
PODO_28035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pod03400
]
PODO_28035
Enzymes [BR:
pod01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PODO_28035
DNA repair and recombination proteins [BR:
pod03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PODO_28035
MMR (mismatch excision repair)
Other MMR factors
PODO_28035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
Terminase_6N
ResIII
GBS_Bsp-like
DEAD
Motif
Other DBs
NCBI-ProteinID:
AIQ76749
UniProt:
A0A1R0WY29
LinkDB
All DBs
Position
complement(6211150..6213489)
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AA seq
779 aa
AA seq
DB search
MQLINIQDAVSRLNPPQRQAVETTEGPLLIMAGAGSGKTRVLTHRIAWLIANRKAPPWAI
LAITFTNKAAREMQERVSKLVGPEGRDIWVSTFHSMCVRILRKDIERIGFTSNFSILDST
DQLSVIRNCMKELNIDTKKFEPKAVQAIISASKNELITPAQYEQKVGDYFEGLVAKVYKM
YQRRLRSNNSLDFDDLIMKTIELFKEVPEVLDFYQKKFKYIHVDEYQDTNRAQYMLCRML
ADSHHRICVVGDSDQSIYRWRGADITNILNFEEDYPEAKTILLEQNYRSTANILNAANGV
IALNSGRKPKKLWTDSEEGAKIKVYRADSEHDEGYFVTGEISKNVKQGQAYQNHAILYRT
NAQSRVIEEILIKSDIPYQIVGGIKFYDRKEIKDLLAYLRLLSNPDDDISLTRIINVPKR
GLGDTTVGKLAAAAGERGVSIFRVLQTVDDLGFAGRTRNMLVEFYDMIEALHRMVEFLSV
TELTEKILEMSQYRLELQNENTLESRSRLENIDEFLSVTMEFEKNNEDKSLVSFLTDLAL
IADIDSVNDDEEDRSDAVVLMTMHSAKGLEFPTVFIVGMEEGVFPHSRAFQDNDELEEER
RLAYVGITRAEKQLFLSCARMRTLFGRTTANQPSRFLEEIPEELKEDTVKTQDRFQRGGA
EVGGAYGGRGFGSGGRGNFGGRGGAAGATPAGGGSTASAAASKSSVTVTSGGAQRATGAG
AAAAGDYKAGDKVSHGKWGTGTVVSVKGSGNDTELQIAFPAPVGVKRLLAGFAPITKVE
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgcaacttattaacatacaagacgcggtcagccgattgaatcctccacaaaggcaggct
gtcgaaactactgaaggaccccttttgattatggctggtgcgggcagtgggaagacgaga
gtgctgactcacagaattgcctggctgattgctaatcgaaaggcgccgccttgggcgatt
ttggcgattacatttacgaataaagctgcgagggaaatgcaggaacgtgtatctaagctc
gttggacctgagggaagagatatttgggtatccacctttcactccatgtgtgttcggatc
ttgcggaaggatattgagcgcattggatttacttccaacttctcgattctggactctaca
gaccagttatcagtaattcgtaattgcatgaaggaactcaatattgatacgaaaaaattc
gaaccgaaagctgtacaagccataattagcgcatctaagaatgaactgattactccggcg
cagtatgagcaaaaagtcggtgattatttcgaaggtttagttgctaaggtttataaaatg
tatcaaagacgtttgagaagcaataactcgcttgattttgatgatttgattatgaagact
atcgaattatttaaggaagttcccgaggttctggatttttaccaaaagaaattcaaatac
atccatgtggatgagtatcaggatacgaacagagcacaatacatgttgtgccgcatgctg
gcagacagccaccaccgcatttgtgtggtaggggatagtgaccagtcgatctatcgctgg
cgtggtgcggatattacgaatattcttaattttgaagaggattatccggaagcgaagacg
attctgctagaacagaattaccgttcaaccgctaatatcctgaatgcagccaatggggta
atcgcgcttaatagtggccgtaaaccgaaaaagctgtggaccgattccgaggaaggcgcc
aagattaaggtgtaccgggcggattccgagcatgacgaaggatattttgtaaccggagaa
atcagcaaaaatgtgaaacaaggtcaagcctaccagaatcacgcgattttgtatcggacg
aatgctcagtcacgggtaatagaggaaattctgatcaaatcagatattccatatcaaatc
gttggcgggatcaagttctatgatcgtaaagaaatcaaggatctgctggcgtatctacgt
ttattgtctaaccctgatgatgatatcagcctgacgcgtattattaatgttcctaagcgt
ggattaggagatacaacggttggtaagctggcagctgcggctggtgaacgtggtgtttct
attttccgcgttctgcaaacggtcgatgatttgggctttgctggacggacgcggaatatg
ctagtagagttctacgatatgattgaagctctgcatcgtatggtggagttcttgtctgta
accgaattgacggaaaaaatactggagatgtcgcagtaccgtttggagctgcaaaatgaa
aatacactcgaatcacgttcgcggctagagaatatcgatgagttcttatcggtgacgatg
gagtttgaaaagaacaatgaagacaagtcgctggtctccttcctcacggatcttgcactt
atcgcagatatcgatagtgtgaacgatgatgaagaggatcgtagtgatgcggttgtgtta
atgacgatgcacagcgccaaaggtctggagttcccgacggtatttatcgtcggaatggaa
gaaggcgtgttcccacacagccgtgcctttcaggacaacgacgagctggaagaggaacgc
cggcttgcgtatgtagggatcacccgcgcggagaaacaactgtttctctcttgtgcgcgg
atgcgcacgctctttgggcggacgacggcgaaccaaccgtcccgcttcttggaggagatt
ccggaggaactgaaggaagataccgttaagactcaagaccgcttccagcgcggaggcgcg
gaggtaggcggtgcttacggcggacgcggcttcggcagcggtggccgtgggaactttggc
ggccgaggtggcgccgccggagctacgccggcaggcggcggaagcacggcgtcagcggcg
gcaagcaagagcagcgtgaccgtgacctccggaggcgcacagcgtgctaccggagcaggg
gctgcagcagctggcgattacaaagcgggtgacaaggtctcccacggcaaatggggcacc
ggcaccgttgtatctgttaaaggcagcgggaatgacacggagctgcagattgcttttccg
gcaccagtgggtgtcaaacgtctgcttgcggggtttgcgccgattaccaaagtggaataa
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integrated database retrieval system
