KEGG   Paenibacillus odorifer: PODO_28590
Entry
PODO_28590        CDS       T03326                                 
Name
(GenBank) hypothetical protein
  KO
K02240  competence protein ComFA
Organism
pod  Paenibacillus odorifer
Brite
KEGG Orthology (KO) [BR:pod00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pod02044]
    PODO_28590
Secretion system [BR:pod02044]
 Type II secretion system
  Competence-related DNA transformation transporter (DNA-T) core components
   PODO_28590
SSDB
Motif
Pfam: Helicase_C DEAD ResIII AAA_30 Flavi_DEAD AAA_22
Other DBs
NCBI-ProteinID: AIQ76854
LinkDB
Position
complement(6349316..6351328)
AA seq 670 aa
MQVAVYAVECKGSWRVRISLDLRVDRWWWSVARPEKKDGSSLAANSLVLLSSALPLSWAV
KLRDSFKQRSVMSTWAIKEWGQYINRMLEAELREEKEAGGLWESQWLNDGIFIWKPNKSS
FGIEQDNKKNERYCGSEKKGFDSGLLEFDSEQLLRAVAGRSLLEPEVEALLAEELPELGG
CWRQAAQLAHLQGRLLLTAAVGSAPPAAHGARARQLPAGAGVMMRAAARLPHILRRGAVA
RRAVSRCLRCGSVPTGRTVCAACGLMGCAYCEACLALGRSRACALLLRSAALPAVRCTAA
LDPAAAAGRWGLSPAQAGAAGTALGFLAEPRKRSASTCPERFLLWAVTGAGKTEMIFPLL
EAVLAAGGRALVATPRRDVVLELAPRLARAFPAEDIAVLYGGSADRWVSGRLTLATTHQL
LRFHQGFDLVIIDELDAFPYHNDPMLAYAAEQACKVDGSSIYLSATPPQEMQRLVRLGKL
PHARVPVRFHGHPLPIPQHLNMPSVLTCLKRGSMPRSLIQNLRKSLNRKAQIFLFVSRIA
HIEGLLVLLRRSFPGVVIEGTSSKDSFRAEKVTAFRNRIISLLVTTTILERGVTVPRSDV
FILDADSGLFDEASLVQMAGRAGRSKDDPDGHVVFASPQWSRSQRGAIAQIRTMNIIAHR
QGYISKGGAI
NT seq 2013 nt   +upstreamnt  +downstreamnt
atgcaagtcgctgtatatgctgtggaatgcaaggggagctggagggttagaatttcatta
gatcttagggtagatagatggtggtggtctgtagctagaccggagaagaaagatgggagt
tccttagcggcgaatagtttggttctgctttcttctgcgttgccgctaagttgggctgtg
aagctccgggacagcttcaaacaaagaagcgtaatgagcacctgggcgattaaggagtgg
gggcaatatattaatagaatgctcgaggctgagttgagagaggagaaagaggcaggggga
ctgtgggagtcacagtggctgaatgatggaatattcatatggaagcctaataaatcgagt
ttcggaatagaacaggacaataagaagaacgaaaggtattgcgggagtgaaaaaaagggt
tttgattctggattgctagaattcgattcagagcaattattgcgggctgtggccgggcgc
tctttattggagccggaagtagaagcgctgctggcagaagaattgccagagctagggggt
tgctggcgccaggcggcacaactggcgcatctacaggggcggctgttgcttacagccgcc
gtaggcagtgcgcccccggctgcgcacggggcgcgggcccgccagctccctgcgggagct
ggcgttatgatgcgtgcggcggctaggctgccgcacatattgcggcgcggcgctgtcgct
cgccgcgcggtttcgcgctgcctgcgttgcggcagcgtccccaccggtcgcacggtatgc
gccgcgtgcgggcttatgggctgcgcctattgcgaggcctgcctcgcgcttgggcgcagc
cgggcttgtgcgctgctgttgcgcagcgcagcacttccggccgtgcggtgcacggccgcc
cttgaccccgccgcggccgcaggccggtgggggctgagcccagcgcaggcgggagccgct
ggcactgcgctgggttttctggcggagccgcgcaagcggtccgccagtacctgcccagag
cggtttctgctctgggcggtgacgggagcggggaagacggagatgatcttcccactccta
gaggctgtgctcgccgccggagggcgggcgctggtagcgacgccgcgccgcgacgtcgta
cttgagctcgcgccgcggctcgcccgggcttttccggcggaggacatcgccgtactttat
ggcggcagcgcagatcgctgggtgagcggtcgcttaacgctcgctaccacccatcagctc
ctgcgcttccatcaaggttttgatctcgtaatcatcgacgagctggatgcgtttccctac
cacaatgatcctatgttggcctatgccgctgaacaagcctgtaaagtggacggctcttcc
atttatttatcagctacgccaccacaagaaatgcagcgtttggtccggttaggcaaactt
ccacatgccagagtgcctgtccgcttccatggtcatcccttgcctatcccgcagcatttg
aatatgccttctgttctaacctgtctgaagcgtggaagtatgccaagatcccttatacag
aatcttcgaaagtcactgaacagaaaagcacaaatttttctgtttgtgtctcgcatagct
catatcgaaggtttgctggtactgcttcgtcggagctttcctggcgtggttattgaaggc
acctcgtccaaggattcatttcgggcagagaaggtgactgcttttcgcaaccgtatcatc
tctttgttagtaactactacgatcctggaacggggagttaccgtgccacgcagtgatgtg
tttattttggatgcagacagtggcctttttgacgaagcttctttggttcagatggcaggc
cgtgccggacgttctaaagacgatcctgatgggcatgttgtatttgcctccccacagtgg
agccgatcccagcgtggagcgattgctcagattcgtactatgaatatcatcgctcaccgc
caaggatatatcagtaaaggtggggctatatga

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