Paenibacillus odorifer: PODO_30480
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Entry
PODO_30480 CDS
T03326
Name
(GenBank) peptidase M15
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
pod
Paenibacillus odorifer
Pathway
pod00550
Peptidoglycan biosynthesis
pod01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pod00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PODO_30480
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pod01002
]
PODO_30480
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pod01011
]
PODO_30480
Enzymes [BR:
pod01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
PODO_30480
Peptidases and inhibitors [BR:
pod01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
PODO_30480
Peptidoglycan biosynthesis and degradation proteins [BR:
pod01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
PODO_30480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
Beta-lactamase
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
AIQ77206
UniProt:
A0A1R0Z4N5
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All DBs
Position
complement(6790723..6791667)
Genome browser
AA seq
314 aa
AA seq
DB search
MKRRILIWAGAALIVVVLITVWRPIELGFKPDIDAGSAVLLDMDSGDIWVNINGDVPMPP
ASVSKLMTEMIVLDHITSGTLRWEDRVPISAYASQMGGMSLSLKRGDFYTVRELFEGITI
YSANDAAVALAEYMAGSEDSFVLMMNDRARSLGLSPNTVFTNASGLSSKDLGIIRQPTHI
GGQTMMTARDTAKLAAALIHNHPDVLNISGRTQMQLKDKGLYVSNSNLMLPGMGGAYAYD
GADGLKTGYDSQTGYCIAGSAQREGHRLIAVVMGAETYGSRFEGAAKLFDYGFFRGLHYG
ERVKHIIHALGIRS
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgaagagacggatattaatatgggctggtgcagctttgatagtcgttgtcttaattacg
gtgtggaggcctatcgagttgggctttaaaccggatattgacgcgggttcagcagtgctg
ctagatatggatagtggagacatatgggtcaatataaacggcgatgtgcctatgccaccg
gccagtgtgtctaaattaatgactgaaatgattgtgctggatcacataacctctggaacc
cttaggtgggaggatagagtccctattagtgcttacgccagtcaaatgggaggtatgagt
ctctcattaaaacgaggagatttctatacagtaagggagctattcgaaggcatcaccata
tattctgctaatgatgctgcagttgcattggcagaatatatggcaggatcagaggattct
tttgtacttatgatgaatgatagagcacgtagtttaggtttatctcctaatacggtattt
accaacgcctctggattgtctagcaaggatcttggtatcattcgtcagcctacgcatatc
ggtggccagacgatgatgacagcgagggatacagccaaattggcagctgcgctaatccat
aatcatcctgatgtactgaatatttccggtcgtacacagatgcaattaaaggataaaggg
ttatatgttagtaatagcaaccttatgcttccaggtatgggcggcgcttacgcatacgat
ggagcagatgggttgaagactggatatgatagccagacgggatattgtattgcgggatca
gcccagagggaggggcaccggcttattgcggtcgttatgggggcggagacttatggcagc
cgatttgagggtgctgctaaattgttcgattatgggtttttccgcggtttacattatgga
gaacgggtaaaacatattatacatgcccttgggattcgaagttaa
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