Paenibacillus odorifer: PODO_30490
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Entry
PODO_30490 CDS
T03326
Name
(GenBank) DNA mismatch repair protein MutS
KO
K07456
DNA mismatch repair protein MutS2
Organism
pod
Paenibacillus odorifer
Pathway
pod03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PODO_30490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pod03400
]
PODO_30490
DNA repair and recombination proteins [BR:
pod03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
PODO_30490
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GFIT
Motif
Pfam:
MutS_V
AAA_21
DUF7646
MSSS
Motif
Other DBs
NCBI-ProteinID:
AIQ77208
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Position
complement(6793664..6795613)
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AA seq
649 aa
AA seq
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MNLQSLNTLEYEIIKTELSRHAVSYVGKKTVEELMPMTYLPSIQRAMEETSEAKELLERG
SSVPIPSLEGIEWIMSLMGTGYLYSEQDFTAVATFLKSCSQLRKYMASKEQSAPRIAAYA
SSLLELNHVREAIDRCIRFGAIDDGASKGLERVRKRIGVAKERLHKKIDGIMSRHQSILQ
ENIYSQRGGRYVIPVKREYHKQIKGSVLDQSTSGQTVFIEPDEIASMQIELDLLLGEEAR
EEAVILSMLTSMVEQEQTALRLNIEVTGTYDFIFAKAKYARTLGASEVTLNDRGFLRMNG
GRHPMLQGMIPISLEIGKGYKSLIITGPNTGGKTVVLKTLGLLTLMAQSGLLIPVEEGSE
FTVFTDVISVIGDGQSLAQSLSTFSAQMKSIEGMLRDASKGVLLLIDELAAGTDPGEGIA
LSIAILEELSRKGANIIVTTHFNELKAFAAATAGFQNARMEFDKETLQPLYRLTIGEAGE
SYALQIAKKLGIQDNVIKRSWEIVEAQQQRLQKGDGSAWASLFSKEGEKGKTAPVIEDFE
KEEKSVESLSDKEKQTQYEIGDAVLVTSLGRIGIVYEKKDHLGMVGVMIQKQKMRINHKR
LKPYLSKDELYPEEYDFDIIFESKDTRKKRKLMQRKHVEGLRITHKDEE
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
gtgaatttacaaagtctaaacacgttggaatacgaaattattaaaaccgagcttagccgt
catgcggtatcttatgtaggaaagaaaactgtagaagagcttatgcctatgacctatttg
ccttccattcaaagagcgatggaggaaacgtctgaagctaaagagctgctggagcggggg
tccagtgtaccgattccttcattagaggggattgagtggatcatgtcactaatggggact
ggatatctgtacagtgagcaagacttcactgcagtggctacatttctaaagagctgtagt
caattgcgcaaatatatggcttctaaagagcaaagtgctccccggattgctgcttatgcc
tcctctctgctggaattaaatcatgtgcgggaagcaattgaccgctgtatccgctttggg
gcgattgatgatggagctagtaaggggttagagcgggttcgtaaacggattggcgtagct
aaagaacgtcttcataaaaaaatcgacgggatcatgtcgcgccatcaatcgattttgcaa
gagaatatttatagtcagcgtggtggacgttacgttatccccgtaaagcgggagtatcat
aagcaaataaagggatcggtactcgatcaatccacaagtggacagacggtgttcatcgaa
ccagatgagatcgcctccatgcagattgagctggatttgttattaggagaagaggcacgt
gaagaagctgtgatcctcagtatgctgaccagcatggtagaacaggaacaaactgcactg
cgcctaaatatcgaggttacaggcacctatgattttatttttgccaaagcaaaatatgca
cgaacgctgggagcatctgaggttactctaaatgataggggttttctaaggatgaacgga
ggcagacatcccatgctgcagggcatgattccaattagcctggagatagggaagggatat
aaatccctaatcattacaggtccaaatacaggcgggaaaacggtggtgctcaagaccctc
gggctgctgaccctcatggctcaatcggggttgttgattccggtcgaggaggggagtgag
tttacggtctttacggatgtgatcagtgtaatcggagacggacaaagtttggcccaatca
ctcagtacattttcggcacaaatgaagagtattgagggaatgctgagagatgcctctaaa
ggggtgctgctgctcattgacgagctggcggcaggtacagaccctggggaaggaatcgcc
ctctcaatcgccattctggaagagctgagccgtaaaggggcgaatattatcgtcacaacc
cactttaacgagctaaaagcctttgccgctgcgacagccggttttcaaaatgcacgaatg
gaattcgacaaagaaacgctgcagccgttgtatcgtctgactatcggagaagcgggggag
agttatgctctgcaaattgctaaaaagctgggtatccaggataacgttatcaagcgatcg
tgggagatcgttgaggcgcagcagcaaaggctgcagaaaggtgatgggtcggcatgggca
agtctttttagcaaagagggagagaaagggaagactgcacctgttatagaggattttgaa
aaagaagaaaagtctgtggaatcactgagcgataaggagaagcagacccagtatgaaatt
ggtgatgccgttcttgtaacttcactggggcggataggaattgtttatgagaaaaaagat
cacttaggaatggtcggagtgatgatccagaagcaaaaaatgcggattaatcataaacgt
ttaaagccatatctatccaaagatgagctgtatcctgaggaatatgactttgatataatt
tttgagagcaaggatacccgtaaaaagcgtaaattgatgcagcgtaagcatgtcgaaggc
ctgagaattacgcataaggatgaagaataa
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