Candidatus Phytoplasma oryzae: PIE28_00150
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Entry
PIE28_00150 CDS
T08823
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
poe
Candidatus Phytoplasma oryzae
Brite
KEGG Orthology (KO) [BR:
poe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
poe03032
]
PIE28_00150 (gyrB)
03400 DNA repair and recombination proteins [BR:
poe03400
]
PIE28_00150 (gyrB)
Enzymes [BR:
poe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PIE28_00150 (gyrB)
DNA replication proteins [BR:
poe03032
]
Prokaryotic type
DNA Topoisomerases
PIE28_00150 (gyrB)
DNA repair and recombination proteins [BR:
poe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PIE28_00150 (gyrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
RNA_pol_Rpb6
PdaC
Motif
Other DBs
NCBI-ProteinID:
WCA22463
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All DBs
Position
25597..27504
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AA seq
635 aa
AA seq
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MVKNKNYDAESIQILEGLEAVRVRPGMYIGSTSEKGIYHLVWEIVDNSIDEALAGFANEI
TLEILQNNVIRISDNGRGIPVGIHPKTQKPAVETILTTLHAGGKFNNNSYKISGGLHGVG
ASVVNALSSWFTVEIHLNKKIHFQKYEKGVPVTSLEIKGNTEKTGTIITFLPDYEIFKEI
KNFSYRLDILKNRIQQLAFLNKNLKLNIIDKSIEPNKNFNFCYKEGIQEYLRYLNENKKS
INTEFYQEFYSDNISFEISFQYSETYSTNIYSFVNNIPTFEGGTHEEGFKTALNKVLNKY
AKEKNLLKKDISFISEDSLEGITVIISLKYNNPIFEGQTKTKLGNIEIKQFISKTFGDKL
ERYLLENPKEAKKIIEKCLLSIKARIAAKRAREITRRKSPLDSFGFASKLADCYVKEPSL
SELYIVEGDSAGGSAKQGRDSKYQAILPLRGKIINVEKSRLEKVLSNNEIISLIQAIGTG
IDKEFNLEKLRYHRIIIMTDADVDGAHIRTLLLTFFFRNLKPLLEKGFIYFAQPPLYKIQ
QNKKIQYVYNEKELKEFLSKENNKKIFLQRYKGLGEMNPEQLWETTMNPENRTLLKVNLE
NILEADRTFSMLMGEEVSARKDFIKENAIYADLDV
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggttaaaaataaaaattacgatgcagaaagtattcaaattttagaaggtttagaagct
gtaagagtaagaccaggtatgtacattggttctacttctgaaaaaggaatataccattta
gtttgggaaatagtagataactctatagatgaagctttagctggtttcgcaaacgaaatt
actttagaaatcttacaaaataatgtaattcgtatttctgataatggacgaggaatacct
gtaggaatacatccgaaaactcaaaaaccagccgtagaaactattttaactacattgcat
gcaggaggaaaattcaacaataattcttataaaatatcaggaggtttacatggagtagga
gcatcagttgtaaatgctctttcctcttggtttacagttgaaattcatttaaataaaaaa
atacattttcaaaaatatgaaaaaggagttcctgttacttctttagaaataaaaggtaac
acagaaaaaacaggtaccataattacttttttgcctgattatgaaatctttaaagaaata
aaaaatttttcttatcgtttagatattctaaaaaatagaatccaacaattagctttttta
aataaaaatttaaaattaaatattattgataaaagcattgaaccaaataaaaattttaat
ttttgttataaagaaggtattcaagaatatcttagatacttaaatgaaaataaaaaaagt
attaatacagaattttatcaagaattttattcagataatatttcttttgaaatatcattt
caatattcagaaacttattcaactaatatttattctttcgtaaataatattcctactttc
gaaggaggaacacatgaagaaggttttaaaacagctttaaataaagttttaaataaatat
gcaaaagaaaaaaatttattaaaaaaagatattagttttataagcgaagatagcttagaa
ggaattacagtaattatttcgttaaaatataataatcctatatttgaaggtcaaactaaa
actaaattaggcaatatagaaataaaacaatttatttctaaaacatttggagacaaacta
gaaagatatttattagaaaatcctaaagaagccaaaaaaataatagaaaaatgtttatta
tctattaaagccagaatagccgcaaaaagagctagagagataacacgtagaaaatctcct
ttagattctttcggatttgcttctaaactagctgattgttatgttaaagaaccatcttta
tctgaattatatattgtagaaggtgattcggcaggcggttcggcaaaacaaggaagagat
tctaaatatcaagctattttacctttaagaggaaaaataataaatgttgaaaaatcaaga
ttagaaaaagtattaagtaataatgaaattatctctttaatacaagctattggtacagga
attgataaagaatttaatttagaaaaattacgttatcatcgtattattataatgacagat
gcagatgtagatggagcacatataagaacactattactaactttcttttttagaaattta
aaacctttattagaaaaaggttttatttattttgctcaacctccattatataaaattcaa
caaaataaaaaaattcaatatgtatataatgaaaaagaacttaaagaatttttatcaaaa
gaaaataacaaaaaaatttttttacagagatataaaggtttaggagaaatgaaccctgaa
caattatgggaaactactatgaatcctgaaaatagaactctattaaaagttaatttagaa
aatattttagaagcagacagaacttttagtatgttaatgggagaagaagtttcggctaga
aaagattttataaaagaaaatgctatatatgcagatttagatgtttaa
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