Candidatus Phytoplasma oryzae: PIE28_00840
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Entry
PIE28_00840 CDS
T08823
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
poe
Candidatus Phytoplasma oryzae
Pathway
poe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
poe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PIE28_00840 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
poe03019
]
PIE28_00840 (rny)
Messenger RNA biogenesis [BR:
poe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PIE28_00840 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
HDOD
KH_1
Peptidase_M75
Motif
Other DBs
NCBI-ProteinID:
WCA22579
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All DBs
Position
complement(184035..185618)
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AA seq
527 aa
AA seq
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METIIIFFIILFCLSNIFSFLVTFFYFKLQKEELKKKIKKIEKQIKEKIEKSEIISEKII
SEANNKNYLLKKETEEDLKQRRKIIVNLEEKIIHKEELLVSRTEYLNKKEETLYKKEQEI
NNLKKEIEKIKNKTEEILIQQQKKVEEISLFTQKQAQLILFQKAQKNIAQEIMNFSKEKE
EEFKLQVQKKAKTLLIYIMQTLSKSNIISEHNISVVFLSDDDIKGKIIGKEGRNIRNFEV
ITGVDLIIEDVPNTVILSSFDPIRREIAKKTLEYLINDGRITPASIEKTFKKMMLEMDNF
IQETGEIAVYETKIGIVDKEIINLLGKLKFRMSYGQNVLNHSLEVAFLAGKLAAEIGEDE
IITRRAGLLHDIGKALNCKKEGNHVKIGIELAIKYKEPIEVIDTIASHHEDQEPNTITAI
LVTIADTISSSRPGARKESIENYFKRINQLEKIANNIEGVEKSYAIRSGREIRVIVKSKE
IDDLKTFIIAQKIKKEIKENKKIQNNRTIKITVIREFRIEDKIEGKE
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaataataatattttttattattttgttttgtttgagtaatatcttttctttt
ttagtaacttttttttattttaaacttcaaaaagaagaattaaaaaaaaaaataaaaaaa
atagaaaaacaaattaaagaaaaaattgaaaaatctgaaataatatctgaaaaaataata
tcagaagctaataacaaaaactatttgttaaaaaaagaaacagaagaggatttaaaacaa
agaagaaaaataattgttaatttagaagaaaaaataattcataaagaagaattattagta
tcaagaacagaatatttaaacaaaaaagaagaaacattatacaaaaaagaacaagaaatt
aacaatttaaaaaaagaaatagaaaaaataaaaaacaaaacagaagaaattttaattcaa
caacaaaaaaaagtggaagaaatatcattattcactcaaaaacaagctcagttaatttta
tttcaaaaagctcaaaaaaatatagctcaagaaataatgaatttttctaaagaaaaagaa
gaagaatttaaattacaagttcaaaaaaaagctaaaactttattaatctatataatgcaa
actttatctaaaagcaatattatttcagaacataatataagcgtagtttttttatcagat
gatgatattaaaggaaaaataataggaaaagaagggagaaatataagaaactttgaagtt
ataacaggagtggatttaattatagaagatgttcctaacacagtaattttaagttccttt
gatcctatcagaagagaaattgctaaaaaaacattagaatatttaataaatgatggaaga
attactcctgctagtattgaaaaaacttttaaaaaaatgatgttagaaatggataatttt
attcaagagacaggagaaatagctgtatatgaaactaaaataggaattgttgataaagaa
ataataaatttattaggaaaattaaaattcagaatgagctatggtcaaaatgttttaaat
cattctttagaagtagcttttttagcaggaaaattagcagcagaaattggagaagatgaa
attatcacaagaagagctggattattacatgatatcgggaaagcattaaattgtaaaaaa
gaaggtaatcatgttaaaataggtatcgaattagcaataaaatataaagaacctatagaa
gttatcgatactatagcttctcatcatgaagatcaagagcctaatacaattacagcaatt
ttagtaacaatagcagatacaattagctcttcaagaccaggggcaagaaaagaatctata
gaaaattattttaaaagaattaaccaattagaaaaaatagctaataatatagaaggtgtg
gaaaaatcatatgctatacgttcaggaagagaaattagagtaatagtgaaatctaaagaa
atagatgatttaaaaacttttattatagcgcaaaaaataaagaaagaaattaaagaaaat
aaaaaaattcaaaataaccgaactataaaaataacagttattagagaattcagaatagaa
gacaaaatagaaggaaaagagtaa
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