Candidatus Phytoplasma oryzae: PIE28_00875
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Entry
PIE28_00875 CDS
T08823
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
poe
Candidatus Phytoplasma oryzae
Pathway
poe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
poe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PIE28_00875 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
poe03400
]
PIE28_00875 (ruvB)
Enzymes [BR:
poe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PIE28_00875 (ruvB)
DNA repair and recombination proteins [BR:
poe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PIE28_00875 (ruvB)
RecFOR pathway proteins
PIE28_00875 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
TIP49
Sigma54_activat
AAA_14
AAA_22
RNA_helicase
nSTAND3
DUF815
MCM
AAA_3
Bac_DnaA
NB-ARC
bpMoxR
NTPase_1
AAA_18
AAA_24
Sigma54_activ_2
AAA_16
AAA_2
Rad17
ABC_tran
AAA_17
AAA_PrkA
NPHP3_N
TsaE
AAA_7
PFam54_60
Parvo_NS1
AAA_28
NACHT
AAA_33
Motif
Other DBs
NCBI-ProteinID:
WCA22586
LinkDB
All DBs
Position
194231..195214
Genome browser
AA seq
327 aa
AA seq
DB search
MSVIVDKISKNVKDEPFLRPQTLEEYIGQENIKKILSVYLTAAKKRNESLDHVLFYGPPG
LGKTTLAKIISNELKVDFKTANGSNLEKIGDLAALLSSLQIGDVLFIDEIHSMPKNVEEV
LYSAMEDYVLNVMIGKNEEKRNIRIDLPPFSLIGATTKFGNISFPLRDRFGLILKLDYYQ
EKELELILKRTSLVYGNKTEKKALEELAKRSRGTPRIANRLLRRVRDFAEIYSDKVITYQ
ITLETLNKLQIDCNGLNAIDYVYLNSLVKKFNCGPVGLKNIAATIGEETFTIEEVYEPFL
IKEGYIKRTSRGRIATRLAIDLFKDKK
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtaattgttgataaaatttcaaaaaatgttaaagatgaaccatttttacgaccg
caaactttagaagagtatataggccaagaaaatattaagaaaattcttagtgtttattta
acagcagcgaaaaaaagaaatgaatcattagatcatgttttgttttatggtccacctggt
ttaggaaaaactaccttagcgaaaattatttctaatgaattaaaagtggattttaaaaca
gcaaatggttctaatttagaaaaaataggagatttagcggctcttcttagtagtttacaa
ataggagatgttttatttattgatgaaatacatagtatgcctaaaaatgttgaagaagtt
ttatattctgctatggaagattatgttttaaatgttatgataggcaaaaacgaagaaaaa
agaaatattagaattgatttgccacctttttctcttataggagctactactaaatttggt
aatatttcctttcctttaagagatcgttttggtcttattttaaaattagattactatcaa
gaaaaagaattagaacttattttaaaaagaacttctttggtttatggtaataagacagaa
aaaaaagctttggaagaattagctaaaaggagtagaggaactcccagaattgctaatcgt
ttattaagaagagtaagagattttgcggaaatttattctgataaagttattacttatcaa
attactcttgagactttaaataaattacaaatagattgtaatggtttaaacgcaatagat
tatgtttatttaaatagtttagtaaaaaaatttaattgtggtcctgtaggtttgaagaat
attgctgctactataggagaagaaacatttactattgaagaagtatatgaacctttttta
ataaaagaaggttatatcaaaagaacttctcgcggaaggattgcgactagattggctata
gatttatttaaagataaaaaataa
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