Candidatus Phytoplasma oryzae: PIE28_01255
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Entry
PIE28_01255 CDS
T08823
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
poe
Candidatus Phytoplasma oryzae
Brite
KEGG Orthology (KO) [BR:
poe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
poe03032
]
PIE28_01255 (topA)
03400 DNA repair and recombination proteins [BR:
poe03400
]
PIE28_01255 (topA)
Enzymes [BR:
poe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PIE28_01255 (topA)
DNA replication proteins [BR:
poe03032
]
Prokaryotic type
DNA Topoisomerases
PIE28_01255 (topA)
DNA repair and recombination proteins [BR:
poe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PIE28_01255 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
zf-UDP
Toprim_2
APC1_3rd
Motif
Other DBs
NCBI-ProteinID:
WCA22248
LinkDB
All DBs
Position
283828..285894
Genome browser
AA seq
688 aa
AA seq
DB search
MKSQVIIVESPAKAKTLNSYFENKILIISSKGHIRDLSYKGPDNLGIDVNDNFKPNYQII
SKQKELIKQIIKKTKGKQVFLATDPDREGEAIAWHLAEVLKLNPLDKNRITFNEINKTTI
LKAFSDPTCIKKKLVDSQEARRILDRIIGFKLSKLIRKKSEAQSAGRVQSVALKLIVEIE
QKRKKFISEKYYLIKAIFKKFQTNLKIKKGYKIKTEKEANQIIKDIKNEDFLLIKINKKK
IIKKTPYPFITSTLQQEAFKNLSMSAKTTMLYAQKLYEGIKIRDKIIGLITYMRTDSYRI
SSSFLEQSKKIIIEKYGAQYLNIDHIKIKKNKNQDAHEAIRPTDISIHPKTLKKYLNKYE
FSLYKIIYERTIASFMSNAIFEQKEFIFKVKKHVFLTEENKILFDGFYKILKKDFQNNDL
CFLKINKKYLPEKIEKTEKETIPPSYFTEASLIKKLENYKIGRPSTYANIIEILKKRSYV
YIKQKKIICTELGILITKLLEDFFPSIINIEYTSQIEKKLDYIYDGKISKLEFLKEFYKK
FMYLWNIANTKIKKEITKEKCSLCNDDFLVKKKGKYGDFLGCNSFPKCKNLVSLKEKEIT
KEKCSLCNDDFLVKKKGKYGDFLGCNSFPKCKNLVSLKEKEITKEKCSLCNDDFLVKKKG
KYGYFLGCNSFPKCKNLVSLKKKRKRII
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctcaagttattatagttgaatcacctgcaaaagctaaaacattgaacagctat
ttcgaaaataaaattttaattatttcttctaaaggacatattagggatttatcatataaa
ggcccagataatttaggaatagatgttaatgataattttaaacctaattatcagatcata
tctaaacaaaaagaactaataaaacaaattataaaaaagacaaaaggtaaacaagttttt
ttagcaacagatcctgatagagaaggagaagctatagcttggcatttagcagaagtatta
aaattaaatccattagataaaaatagaattacttttaatgaaattaataaaacaacaata
ttaaaagctttttccgacccaacttgtataaaaaaaaaattagtagattctcaagaagct
agaagaatattagataggattattggttttaaattatctaaattaattagaaaaaaatct
gaagctcaatccgcaggtagagttcaatcagtagctttaaagttaattgtggaaatagag
caaaaaagaaaaaaatttatatctgaaaaatattatttaataaaagctatttttaaaaaa
tttcaaactaatttaaaaataaaaaaaggatataaaataaaaacagaaaaagaagctaat
caaattattaaagatattaaaaatgaagattttttattaataaaaattaataaaaaaaaa
attattaaaaaaactccttatccttttataacttctacgcttcagcaagaagcttttaaa
aatctttctatgagtgctaaaacaacaatgttatatgctcaaaaactttatgaaggtatc
aaaataagagataaaatcataggtttaattacttatatgcgtactgattcttatagaata
tcttcttcattcttggaacaatctaaaaaaataattatagaaaaatatggtgctcaatat
ttaaatattgatcatataaaaattaaaaaaaataaaaatcaagatgcacatgaagctatt
aggcctacagatatatctattcatccaaaaactttaaaaaaatatttaaataaatatgaa
ttttctttgtataaaataatttatgaaagaactatagcaagttttatgtcgaatgctatt
tttgaacaaaaagaattcatttttaaagttaaaaaacatgtttttttaacagaagaaaat
aaaatattattcgatggtttctataaaatattaaaaaaagattttcaaaataatgattta
tgttttttaaaaataaataaaaaatatttaccagaaaaaatagaaaaaacagaaaaagaa
actattccgccttcttattttactgaagcttctttaattaaaaaactagaaaattacaaa
ataggaaggccatctacttatgcaaatattattgaaattttaaaaaaaagatcatatgtt
tatataaaacaaaaaaaaataatttgtactgaattaggaatattaattacaaaactttta
gaagattttttcccttcaataattaatatagaatatacatctcaaatagagaaaaaatta
gattatatttatgatggaaaaattagtaaattagaatttttaaaagaattttataaaaaa
tttatgtatctttggaatatagctaatactaaaataaaaaaagaaataactaaagaaaaa
tgttctttatgtaatgatgactttttagtaaaaaaaaaaggaaaatatggagatttttta
ggttgtaattcttttccgaaatgtaaaaacttagtttctttaaaagaaaaagaaataact
aaagaaaaatgttctttatgtaatgatgactttttagtaaaaaaaaaaggaaaatatgga
gattttttaggttgtaattcttttccgaaatgtaaaaacttagtttctttaaaagaaaaa
gaaataactaaagaaaaatgttctttatgtaatgatgactttttagtaaaaaaaaaagga
aaatatggatattttttaggttgtaattcttttccgaaatgtaaaaacttagtttcttta
aaaaaaaaaagaaagagaataatataa
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