Candidatus Phytoplasma oryzae: PIE28_01380
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Entry
PIE28_01380 CDS
T08823
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
poe
Candidatus Phytoplasma oryzae
Brite
KEGG Orthology (KO) [BR:
poe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
poe03019
]
PIE28_01380 (rnc)
03009 Ribosome biogenesis [BR:
poe03009
]
PIE28_01380 (rnc)
03036 Chromosome and associated proteins [BR:
poe03036
]
PIE28_01380 (rnc)
Enzymes [BR:
poe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
PIE28_01380 (rnc)
Messenger RNA biogenesis [BR:
poe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PIE28_01380 (rnc)
Ribosome biogenesis [BR:
poe03009
]
Eukaryotic type
90S particles
RNase
PIE28_01380 (rnc)
Prokaryotic type
rRNA processing factors
PIE28_01380 (rnc)
Chromosome and associated proteins [BR:
poe03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
PIE28_01380 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
Dicer_dsRBD
Motif
Other DBs
NCBI-ProteinID:
WCA22272
LinkDB
All DBs
Position
complement(319380..320084)
Genome browser
AA seq
234 aa
AA seq
DB search
MNKCIKYLFSKLDIKPKNIDFYISALTHSSYANEKNFKNRDNERLEFLGDAIINFLMASY
LYKKNQDNEGIMTKKRAQAVCVESLLIYAREIKLKDYILLGKGEKKRYIYNYSIIADAFE
ALFGAIYLDLGYSEVERVFYHIILPCLKKTINIIDFKTKLQELVQTEKKNICYKIISEKG
LAHEKKFLAEVYLENKCLGRGLGKTKKAAEQKAAEKALKNIFSERGQKNVKNTL
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatgtataaaatatttattttcaaaattagatattaaaccaaaaaatatagat
ttttatattagcgctttaacacatagttcttatgcaaatgaaaaaaattttaaaaataga
gataatgaaagattagaatttttaggagatgctataattaattttttaatggctagttat
ttatataaaaaaaatcaagataacgaaggcattatgactaaaaaaagagctcaagcagtt
tgtgtggaatctttattaatttatgctagagaaattaaattaaaagattatattttatta
ggaaaaggagaaaaaaaaagatatatttataattattctattatagcagatgcttttgaa
gctctttttggagctatttatttagatttaggttattcagaagtagaaagagttttttat
cacataattttgccttgtttaaaaaaaactattaatattatagattttaaaactaaacta
caagaattagtacaaactgaaaaaaaaaatatttgttataaaataatatctgaaaaagga
ttagcacacgaaaaaaaatttttagctgaagtttatttggaaaataaatgtttaggaagg
ggattaggtaaaactaaaaaagctgctgaacaaaaagctgctgaaaaagctctaaaaaat
attttttccgaaagaggtcaaaaaaatgttaaaaatactttatga
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