Pontibacillus sp. HMF3514: GS400_00955
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Entry
GS400_00955 CDS
T06374
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pof
Pontibacillus sp. HMF3514
Brite
KEGG Orthology (KO) [BR:
pof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pof03016
]
GS400_00955 (truA)
Enzymes [BR:
pof01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
GS400_00955 (truA)
Transfer RNA biogenesis [BR:
pof03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GS400_00955 (truA)
Prokaryotic type
GS400_00955 (truA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Pus10_C
DUF2344
Hydrolase_3
TOC159_MAD
Motif
Other DBs
NCBI-ProteinID:
QHE50721
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All DBs
Position
169491..170246
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AA seq
251 aa
AA seq
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MERVCCVVQYDGTNYSGFQIQANSNRTIQEKIEKALTKMHKGKPMKIIASGRTDAGVHAY
GQVFHFDSDLYIPEYNWKKGLQTLLPSDIQIVEVHKVSMDFHARYDTSQKEYRYRVLNTK
DKDVFRRNVTYHVPYDLDIDKVKEACKYIEGTHDFTSFSSTKTKVRGERIRTVYEATCEK
QGDELLFIFRGDGFLYNMVRILVGTLIQVGRGRREPEDIPVIMEAKERTKAGVTAPAQGL
FLWKVDYKEQG
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atggagcgtgtgtgctgtgttgttcaatacgatggcacaaactactcgggctttcaaatc
caagccaattcaaaccgtacgatccaagaaaaaattgaaaaagccttaacgaaaatgcat
aaaggtaagccaatgaagattattgcttcgggccgaactgatgctggggtccatgcatat
ggtcaggtctttcactttgattcagatttgtatattcctgagtacaattggaagaaagga
ttacaaacccttttaccgtctgatatccaaattgtagaagtgcataaggtttcaatggat
tttcatgctagatatgatacttctcaaaaagaatatcgataccgtgtgcttaacacaaag
gataaagatgtctttagacgtaatgttacctatcatgtcccctatgatctagatatcgat
aaagtaaaagaagcgtgcaagtatattgaaggtactcatgatttcacttcttttagttca
actaaaacgaaagtgcgtggtgaacgtattcgaacagtatatgaggcgacctgtgaaaaa
caaggagacgagcttctctttatttttcgtggagatggatttctctacaatatggtaagg
attttagttgggacgttgatacaagttgggagaggacgtcgtgagcctgaagatatcccg
gtgatcatggaagccaaagaacgaacaaaagctggcgtcacagctcctgctcaagggttg
tttttgtggaaggtggattataaagaacagggatag
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