Pontibacillus sp. HMF3514: GS400_01585
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Entry
GS400_01585 CDS
T06374
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pof
Pontibacillus sp. HMF3514
Pathway
pof03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GS400_01585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pof03019
]
GS400_01585
03009 Ribosome biogenesis [BR:
pof03009
]
GS400_01585
Enzymes [BR:
pof01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GS400_01585
Messenger RNA biogenesis [BR:
pof03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GS400_01585
Ribosome biogenesis [BR:
pof03009
]
Prokaryotic type
rRNA helicases
GS400_01585
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SUa-2TM
Cas3-like_C_2
Helicase_RecD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QHE54176
UniProt:
A0A6P1HQK9
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All DBs
Position
272799..274280
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AA seq
493 aa
AA seq
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MGFEEATPVQEQTIPLAMDGRDVIGQAQTGTGKTAAFGIPLIEKINQDLKKTQGLVIAPT
RELAMQVATELNRYGRYKGIQVLPVYGGSDMGRQIRSLKQGPQIVVATPGRLLDHIRRKT
ISLNNIHTTVLDEADEMLNMGFIEDIKDILKAVPEQRQTLLFSATMPKEIHEIATKMMKK
PETVKLKAKQMTVEKIDQYFVEVNEAKKFDTLTRLLDIHVPELSIVFGRTKKRVDEVTDG
LNARGFRAEGIHGDLTQKKRMDVLKKFKNGKIDVLVATDVAARGLDISGVTHVFNFDIPQ
DPESYVHRIGRTGRAGNEGYAVSFITPREMAHLHLIEKTTGRKIERRPIPSYDEANKGQQ
QVTIDKLRQTIESNNLETYQSTAADLLEEYDSVTVLSAALKMLTKERKDVPVKLTSLSPI
SVKQAKNDKYKGKGKGRGHRNDRNGKGGYKGGYNKGGNGYKGKGGYKGNGNYKGGGRNRN
QQNNRRRNQGNES
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
ctggggtttgaagaagcaactccagtacaagaacaaacgattcctcttgcgatggatgga
agagatgtcataggacaagcacaaacgggaactggtaaaacagctgccttcgggattcca
ttgattgaaaaaatcaatcaggatctaaagaagactcaaggactagttattgcaccaacc
cgcgagctagctatgcaagtggctacagaattaaaccgatatggtcgttataaaggtatt
caggtactacctgtttatggcggttcagatatgggacgtcaaattcgttccttgaagcaa
ggacctcaaattgtagtagcaacacctggtcgtttattagatcatattcgtcgcaaaacg
atttcattaaataacattcatacaactgttctagatgaagcagatgaaatgttaaacatg
ggcttcattgaagacattaaagatattttgaaagctgttcctgaacagcgtcaaacgcta
ttgttctctgcaacaatgcctaaagaaattcatgaaattgcaaccaaaatgatgaaaaaa
ccagaaaccgttaagctaaaagcgaagcaaatgacggttgagaagattgatcaatacttt
gtcgaagtaaatgaagctaagaagttcgatacactaacacgtcttcttgacattcatgta
cctgaactatcaattgtgttcggacgtacgaaaaaacgtgtagacgaagttacagacgga
ttgaatgctcgcggattccgtgctgaaggcattcatggtgacttaactcagaaaaaacgt
atggacgtactgaagaaattcaagaatggaaaaattgatgttcttgttgcgacagatgtg
gctgcacgtggtcttgatatctctggcgttactcacgtatttaactttgatatcccacaa
gatccagaaagctatgtacaccgaatcggccgtacaggacgtgcaggaaatgaagggtat
gctgtttcgttcatcacaccaagagaaatggctcacctacacttaatcgaaaagacaaca
ggacgtaaaattgaacgtcgtcctattccttcatatgatgaagcgaataaaggacagcag
caagtaacgattgataagttaagacagacaatcgaatccaataatttagagacttaccaa
tcaactgccgctgatcttcttgaagagtatgattccgttacagttctttctgcagcattg
aagatgcttacaaaagaaagaaaagatgttcctgttaagcttacttccttatcaccaatt
agtgtgaaacaagctaagaatgataagtacaaaggtaagggtaaaggacgcggccatcgt
aacgaccgaaacggaaaaggtggttataaaggtggctataacaaaggtggaaatggttac
aaaggtaaaggcggttataaaggtaatggcaactacaaaggtggaggccgtaaccgaaac
caacaaaacaaccgtcgccgtaatcaaggaaacgaatcataa
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