Pontibacillus sp. HMF3514: GS400_01680
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Entry
GS400_01680 CDS
T06374
Symbol
sigB
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03090
RNA polymerase sigma-B factor
Organism
pof
Pontibacillus sp. HMF3514
Brite
KEGG Orthology (KO) [BR:
pof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pof03021
]
GS400_01680 (sigB)
Transcription machinery [BR:
pof03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GS400_01680 (sigB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
GerE
DUF134
HTH_23
IF2_N
DUF1492
HTH_28
HTH_37
Motif
Other DBs
NCBI-ProteinID:
QHE50846
UniProt:
A0A6P1HEZ2
LinkDB
All DBs
Position
290506..291294
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AA seq
262 aa
AA seq
DB search
MATKSQPHNNREGEVYEWIKHLQETPDDEVVQEKIVHQYEDLVQSIAKKYSKNSSIHEDL
VQVGMLGLLAAIRRYDPSYGKSFESFAIPTIIGEIKRFIRDKTWSVHVPRRIKELGPKIK
KAAEELTVDMQRSPSVQEIADYLNVSEEDVLETMEMGKSYKALSVDRKIEADSDGSTVTI
LDLIGNSEKGYDQIDQQMLLEKVLPILSEREQEILKCTYFDNMSQKDTGEHLGISQMHVS
RLQRRALRKLREALQSDQAEAY
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccaaatctcaaccacacaataaccgtgagggtgaggtttacgaatggatcaaa
catcttcaagaaactcctgatgatgaggtcgttcaagagaagatcgttcatcagtacgag
gatctcgttcaatccattgcaaaaaagtattccaaaaacagttcaatccatgaagatcta
gtacaggttgggatgcttggacttttagctgcgattagacgttatgatccttcttacgga
aaatcatttgagtcgttcgctattccgaccataatcggtgaaatcaaacgatttatacga
gataaaacatggagtgtacatgtgcctcgacgcattaaagaactaggtcctaaaatcaag
aaagctgccgaagaattaacagtggatatgcaacggtccccatccgttcaagagattgct
gattatcttaatgtatctgaagaagatgtcttagaaacgatggaaatgggcaaaagctat
aaagcattgtctgttgatcgtaaaatcgaggctgattcggatggaagtactgtcacaatc
ctagatttaattgggaattcagaaaaaggctatgaccaaattgaccagcaaatgctattg
gagaaagtattaccaatcctttcagaaagagagcaggaaatccttaaatgtacttatttt
gataatatgagtcaaaaggatactggggaacatttaggcatatcacaaatgcatgtttct
agattacagcgccgagctcttcgtaagttgcgagaagccttacaatcggaccaagcggag
gcttactag
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