Pontibacillus sp. HMF3514: GS400_02060
Help
Entry
GS400_02060 CDS
T06374
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pof
Pontibacillus sp. HMF3514
Pathway
pof03420
Nucleotide excision repair
pof03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GS400_02060
03430 Mismatch repair
GS400_02060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pof03400
]
GS400_02060
Enzymes [BR:
pof01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GS400_02060
DNA repair and recombination proteins [BR:
pof03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GS400_02060
MMR (mismatch excision repair)
Other MMR factors
GS400_02060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C_2
UvrD_C
FlaX
SLFN-g3_helicase
ResIII
DEAD
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QHE50897
UniProt:
A0A6P1HEE4
LinkDB
All DBs
Position
369113..371578
Genome browser
AA seq
821 aa
AA seq
DB search
MSKEGKTKGLFPFKPGLCTKSAHINYSQFPRSSEFETKYFEDTKEIAQKDLENIEAKKNT
DYQAGITISTNRALRTKDREVKKPILEEQTKKPYFGRLDILNEEGDKETVYIGRNGMADD
NDIRVYHILSAFGAIYNQSKIGDLSHDKLGEVTVNLKRQIESENGEFINFHDLKWDEEKG
YFDPVLEKRLNDNAKEKLSEIWETIQAEQDLVMRKNISVPIFIQGSAGSGKTVIALHRIS
YLLYEHKNINPDKILIMAPNNMYLNYIKDISPDINKVNQSTFEEYCINRLPFKKNKFNMK
DYFHYFKQNMEDDSEYLSIKEKGSIEYKNKLNDFLETSDFLEKYLPKEGINIEFDDVNFT
FTLERIHKLAKDYIENSSFKVAKERVLKTIKQESKSKQGKKDWGFDDRGYERLIDKEILK
LDKSWKIPSVFEIYFDFCTNIEVMKAIMVEEKAELIVENNKINKSKKLVTYDDLPALLFI
QQKYFEGIGILHKRKNQSQPTQEGYDYVLVDEIQDYSPFHIFMIQQVVKNSRMTLLGDLG
QGIFSPRGIDNWDTAFASLQGDAKDEYEYIELSTIYRSTLEIVNYANQILKPYSQDRYTL
SNPIGREGPKPRHHKFNSMNNQLDQIISLCNDLDEQSFESIAIITKDWEEAFALYSGLKH
KIKNVELVGESSKEITGGIIISPVYLTKGFEYDSVIIANASRDVYEDSYYSRKLLYVAVT
RALHQVHVLYRNELTLPLMEIQQPSKAKNIREELKNNQKIKDEIDQSLETNKKSLITKVE
SELNTIFNNQAEEIYELKKKVARLEQEVEYYKKKYLKNKKG
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
ttgagtaaagaaggtaagacgaaaggtttattcccttttaagccaggtttatgtactaaa
agtgcacacattaattatagtcaattcccacgttcttctgaatttgaaactaaatatttt
gaagatacaaaagaaattgcccagaaggacttagaaaacatagaagctaaaaaaaataca
gattaccaagcaggaatcacaatatctactaatagagctcttagaacaaaagatagggaa
gtgaaaaaaccaattttagaggagcaaacaaaaaagccttattttggtaggctggatatt
ttgaatgaagaaggggataaagaaactgtatatataggaagaaatggtatggcagatgat
aatgatattcgagtgtaccatattctttcagcttttggagctatatacaatcaatcaaaa
attggtgatttaagccatgataaattaggggaagtcactgtaaatttaaaaagacaaata
gaaagtgaaaatggtgagtttataaatttccatgacttaaagtgggatgaggaaaaaggt
tattttgatcctgtattagaaaaaaggctgaatgataatgcaaaagaaaagttgtcagaa
atttgggagacaatacaagccgagcaagatttagttatgaggaagaatatatcagtaccg
atattcattcaaggatctgccgggagtggaaaaacagtcatagcactccaccgaatttct
tatttactatacgagcataaaaatataaatccagataagatattaataatggcccctaat
aacatgtacttaaactacattaaagatatatctccggatatcaataaggtaaaccaatca
acttttgaagaatattgcataaacaggttgccttttaagaaaaataaattcaatatgaaa
gattatttccattattttaagcaaaatatggaggatgattctgaatatctatctataaag
gaaaaaggtagcattgaatataaaaataagcttaatgatttcttagaaacaagtgatttc
cttgaaaagtatctaccaaaagaaggtataaacattgagtttgatgatgtgaattttact
tttactttagagagaattcataaattagcaaaggattatatagaaaactcctcttttaaa
gtagctaaagaacgagtattaaaaactattaaacaggaatctaaatcaaaacaaggaaaa
aaagactggggatttgacgacagaggatacgaaaggttaattgataaagaaattttgaaa
ttggataagtcgtggaaaatcccaagtgtatttgaaatatattttgatttttgcacaaac
atagaagtaatgaaggcgattatggtagaggaaaaagctgaacttattgttgagaataac
aaaatcaataaatcaaaaaaattagtaacgtatgacgatttacctgctttactgtttatt
caacaaaaatattttgagggaattggtattctacataaaaggaagaatcaaagtcaacct
actcaggaaggctatgattatgttttagtagatgagattcaagattatagtcctttccat
atttttatgattcagcaagtagttaaaaattctagaatgacactactcggagacttggga
caaggcatattttctccaagaggaatagataattgggatacagcatttgcttcattacaa
ggtgatgccaaggatgaatatgaatatattgaattaagcacaatatatcgctcaacacta
gagattgtaaattatgcgaatcaaatattaaaaccatatagtcaagatagatatacacta
tccaatccaattggtcgtgaaggtcctaaaccaagacaccacaaatttaattcgatgaat
aaccaattagatcaaataataagtttatgtaatgacctagatgagcaatcttttgagagc
atagctatcatcacaaaagattgggaagaggcgtttgccctctacagtggactaaaacac
aaaatcaaaaatgtagagttagttggtgaatcttccaaagagataactggaggtattatt
attagtccagtatatcttacaaaaggttttgagtatgattcagtaattattgcaaatgct
tcaagggacgtgtatgaagactcatattattcacgaaaactattatacgtagcagtaaca
agagcactacatcaagtacatgtactatatagaaatgaactaactttacctttaatggaa
attcaacagccttcaaaggcaaaaaacattagagaagaattaaagaataatcaaaagata
aaagatgaaattgatcaaagtttggaaactaataagaagagcctaataacaaaagtagaa
agcgaattgaatactatttttaataatcaagcagaagaaatatatgagttgaaaaagaaa
gtggctaggcttgagcaagaggttgagtactataaaaagaagtacttaaaaaataaaaaa
ggttaa
DBGET
integrated database retrieval system
