Pontibacillus sp. HMF3514: GS400_04745
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Entry
GS400_04745 CDS
T06374
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
pof
Pontibacillus sp. HMF3514
Brite
KEGG Orthology (KO) [BR:
pof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pof03400
]
GS400_04745 (addA)
Enzymes [BR:
pof01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GS400_04745 (addA)
DNA repair and recombination proteins [BR:
pof03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
GS400_04745 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
Viral_helicase1
DEAD
AAA_12
DUF2059
AAA_30
Cullin_Nedd8
ResIII
AAA_16
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QHE51381
UniProt:
A0A6P1HFM9
LinkDB
All DBs
Position
906613..910338
Genome browser
AA seq
1241 aa
AA seq
DB search
MPTWTPEQERAIYTSGKDVLVAAAAGSGKTAVLVERIIQKLLNQDNPTNIDSLLVVTFTN
AAAQEMRNRVGEALEKALEQQPDSTHLKKQLSLLQRASISTLHSFCLDIVRRYSYMLDLD
PHFRIADEIEADLMRQEIIEDLFEEWYGKEGEERDRFFEVVDRFSSDRSDAEVERLMLDL
YNFSRQNPWPEAWMNDVQAMYDVSPDTPEEDIVWLQILKREVKSQLNAMLKDSEQALNLT
RESDGPYHYAEAIDDDREKIQQALGLVDISWHELQQYMQESGSFTALSRKKVECSDEKKE
RVKNLRDRYKKRWTSLSQEWFARSLPAYLEDMQSLAPVVEQLMVLVREFHERFQQKKKDQ
ALVDFADLEHYCLHVLMDESSTPEEIIPSEVAESYQQQFTELLVDEYQDTNLVQETILRM
VSYGENSGNLFMVGDVKQSIYRFRHAEPSLFLNKYKAFANEKHPAERIDLARNFRSRHEV
LSGTNYIFRQILDEEVGEMTYDKDAELIYSNTIYDEITSSDAEAELVIIDREKHEDQNEE
SGEDFRDLEKAQLEARAYANKIQNWLGHGEGPALQVVDKGTSAKRDVQYRDIVILLRSMT
WAPTIVEELKQQGIPVYAELSTGYFEAIEIKVMLSLLKVIDNPRQDIPLASVLRSPIVGL
NEDELTKIRLAQKKATYYEALTSYRRMGEDDELVHKVEHFLHRLDAWRKRARQGSLSELI
WQIYRETGYYDFVGGIPGGRQRQANLRALYDRARTYEATSFRGLFRFLRFIERIEERGED
LGAARALGEQEDVVRIMTIHKSKGLEFPVVIMGAMDKQFNQQDLMAKYLLHKDHGFGAKM
INPQKRIMYPTLAYHALKKEKQRELLAEEMRVLYVALTRAKEKLVMIGNVSSLEKKLEKW
REWVEHTDWVLPSHYRLETKTYLDWVGPSLIRHQHGETLRGETETHPLLPQDIAQDESSW
RVTLLHGSELVDPDALQTNDHEAVERAIRSWEPLNPAEGPNEEVERRLSFQYPHQKAIHH
RAKQSVTELKRQREVKDEYSAESLMQPFKQPIVSRPRFMQKSQELSATEKGSAMHTVMQH
LPFEKVLSVQEIENEVEVLVEREFLTRDEAAVIDFDAIAAFYESEMGQRLIDADRVYREV
PFSLALPAHEVYADWEEETDEKVFIQGVIDLIIPGEDGWIILDYKTDQVQQPITERVSDK
LVSRYSTQLSLYAEALERIWNKPVEEKYLYFFNAPLLTKVD
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atgccaacctggacacccgaacaagaacgagcgatatacacgagtggaaaagatgtactt
gttgcagcggcagccggatccggaaaaacggctgtcctggttgagcgaatcattcaaaag
cttttaaaccaagataatcctaccaacattgactccttgcttgtcgtaacattcacgaat
gcagcggctcaagagatgcgaaatcgtgttggggaagctcttgaaaaagcgctagagcag
caacctgactcaacccatttgaaaaagcagctatctctgcttcaacgtgcatcgatatca
actttacactccttctgtttagatatcgtgagacgctactcttatatgcttgatctcgat
ccgcatttccgtattgctgatgagattgaagcggatttaatgcgtcaggaaatcattgag
gatctttttgaagagtggtacggaaaagaaggggaagaacgtgatcgcttttttgaagtc
gtggaccgtttttcaagtgaccgaagtgatgcagaggttgagcgcttaatgcttgattta
tataacttttccagacaaaatccttggccagaagcatggatgaatgatgtccaggcgatg
tatgatgtttcacctgatacgccagaagaggacattgtatggcttcagattttgaaaaga
gaagtaaagagtcaattgaatgctatgctcaaagattctgagcaggctcttaaccttacg
cgagaaagtgatggaccgtatcattatgctgaggctatcgatgatgatcgtgaaaaaatc
cagcaagccctaggacttgtggatatctcatggcatgagcttcagcagtatatgcaagaa
tcaggcagtttcacagctttgtcccgtaaaaaggtagaatgctctgatgagaaaaaggaa
cgcgtaaaaaacttacgtgatcgttacaaaaaacgttggacatccttgagtcaggagtgg
ttcgcccgttcactgcctgcatacttagaagacatgcaatcacttgcgccggttgtagaa
cagctgatggtccttgttcgtgagtttcatgaacgcttccaacaaaagaaaaaggatcag
gcactcgtcgattttgcggacttggagcactactgtttacacgtattaatggatgagagc
tcaacgccagaagagattattccatctgaagtagcagagagctatcaacagcaattcaca
gaactccttgttgatgagtatcaggatacgaatctcgtacaagagacgattcttcgtatg
gtttcctatggagaaaattccggtaacttgtttatggtaggggacgtgaagcagagtatt
tatcgcttccgtcacgcagaaccatccctgtttttaaacaaatataaagcttttgcgaat
gaaaagcatcctgctgagcgaattgacttggctcgtaatttccgaagccgtcatgaagta
cttagcggaacgaactatatattccgtcaaattcttgatgaagaagttggggagatgacc
tatgacaaggatgccgaactcatctatagcaacacgatttatgatgagatcacatcaagt
gatgctgaagcagaactggtcattattgaccgtgaaaagcatgaagaccaaaacgaagaa
tcaggggaagattttcgtgaccttgaaaaagcgcaactagaagcacgagcttatgccaac
aaaattcaaaattggctcggtcatggtgaaggtcctgctctgcaggttgtcgataaagga
acatctgccaaacgtgatgtacaataccgtgacattgtgattttgcttcgttccatgaca
tgggcacctacaattgtggaagagttgaaacaacaaggtatcccagtttatgcggagctt
tccacagggtactttgaagcgattgagattaaagttatgctcagtctgctaaaggtcatc
gataacccaagacaagatatcccgctagcttcagtgttacgttctccgattgtcggattg
aacgaagacgagttaaccaaaattcgtctggcacagaaaaaagcgacgtactatgaagct
ctaacttcgtatcgccgcatgggggaagacgatgagctcgttcataaggtcgagcacttc
cttcaccgtcttgatgcctggcgtaaacgtgcgcgacaaggatccttatctgagctgatt
tggcaaatttatcgcgagactgggtattacgattttgttggaggtatcccaggtggtcgt
cagcgtcaggctaacttgcgagcgttatatgatcgtgctcgcacgtatgaagcgacgtct
ttccgtggtttattccgtttccttcgttttatcgaacgtattgaggaacgtggagaagac
cttggtgcagcgcgtgcgctaggtgaacaagaagacgttgtccgaattatgacgatccac
aaaagtaagggacttgaattccctgtcgttatcatgggagcaatggataagcagtttaac
caacaggatctcatggcgaagtacttgctccacaaggatcatggttttggcgcgaaaatg
ataaaccctcaaaaacgcatcatgtacccaacacttgcgtatcatgcgttgaaaaaagag
aaacaacgtgagcttttagcggaagaaatgcgcgttctttatgttgccttaacacgtgcc
aaagaaaaacttgtgatgattggaaatgtatcgtcactggagaagaaattagagaaatgg
cgtgaatgggttgagcacacggattgggtattaccatcacattaccgtttagaaaccaaa
acgtaccttgattgggttggaccttcccttattcgacaccaacatggagaaacgttgcgt
ggtgagactgaaacccatccattattaccgcaggacatcgctcaggatgaatcaagttgg
cgtgtaacgcttttacatggaagtgagctagtagacccagatgctttacaaacgaatgat
catgaagcggtagaaagagcgattcgttcctgggagcctctcaatccagcagaaggaccg
aatgaagaggttgagagaagattgagtttccagtaccctcatcaaaaagcgatccatcat
cgtgcgaagcaatctgttactgaactgaaacgccagcgtgaagtgaaggatgagtacagc
gcagaatcccttatgcaaccttttaaacagccgatcgtctccagacctcgctttatgcaa
aagtcacaggagttatctgctacggaaaaagggagtgccatgcacactgttatgcagcac
ttaccgtttgaaaaagtgctttctgttcaagagattgagaacgaagtcgaagtactagtt
gagcgtgaatttctcactcgtgatgaagcagctgtcattgattttgatgccatcgccgct
ttctatgaaagtgaaatgggtcaacgtttgattgatgcggaccgcgtgtatcgtgaagtt
ccattcagtttagccctgcctgctcatgaagtgtatgctgactgggaggaagaaaccgat
gaaaaagtatttatccagggtgtcattgacttaatcattccaggagaagatggatggatt
attcttgactacaagacagatcaagtccagcaacctataacagaacgagtaagtgataag
cttgtatctcgatatagtacccagctttctttatatgccgaggcacttgagcgtatatgg
aacaaaccagttgaggaaaagtatttatacttctttaacgctccacttttaacgaaagta
gattga
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integrated database retrieval system
