Pontibacillus sp. HMF3514: GS400_09300
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Entry
GS400_09300 CDS
T06374
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
pof
Pontibacillus sp. HMF3514
Pathway
pof02020
Two-component system
pof02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pof00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GS400_09300
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GS400_09300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pof03021
]
GS400_09300
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pof02035
]
GS400_09300
Transcription machinery [BR:
pof03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GS400_09300
Bacterial motility proteins [BR:
pof02035
]
Flagellar system
Flagellar assembly proteins
Stator
GS400_09300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
UPF0122
Motif
Other DBs
NCBI-ProteinID:
QHE52214
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Position
1794718..1795497
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AA seq
259 aa
AA seq
DB search
MTDHSAPQEQQLWERWEQERDSETANELVRNYMHLVHYHVHRISAHLPQNVNKEDIKSLG
LIGLYDAIEKFDLSRDLKFDTYASFRIRGAIIDGLRKEDWLPRSVRDKSKKIETTAEMLE
QRLQRAPTSAEIAEEIESTEQEVEQVMKDTVFANVLSMEEKPKDTKSEHKEGIGYSIPDN
SSKNPDFQMVKGEDYKELAEGIKQLNEKEQLVISLFYHEELTLTEIGQVLELTTSRISQI
HARALFKLRKILENLATVE
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatcattcagctcctcaggaacaacagctatgggaaagatgggagcaggagcgt
gacagtgaaacagcgaatgaattagtgcgcaattacatgcaccttgttcactatcacgta
caccgtatttctgctcatttacctcaaaatgtgaataaagaagatatcaaaagtttaggc
ttaatcggactttatgatgcaatcgaaaaatttgatttgtctcgtgacttgaagtttgac
acctacgcctcatttagaattcgtggcgcaattattgatggattaaggaaagaagattgg
ttgcctaggtctgtgcgagataaatctaaaaaaattgaaaccactgctgagatgttagag
caacgccttcagcgtgcgccaacttctgcagagattgctgaggaaattgaatctacagaa
caagaagttgagcaagtgatgaaagacactgtttttgccaatgtgctttctatggaggaa
aagcctaaagacacgaagagtgaacataaagaaggaattgggtattccattcctgataac
tcctctaaaaaccctgattttcaaatggtaaaaggtgaggactataaggagttagcagaa
ggaatcaaacaattaaatgaaaaagaacagttagttattagtttattttatcatgaagaa
ctcactttaactgagattggacaagtacttgagttaaccacttctaggatttcccaaata
catgctcgagccttatttaagttgcggaaaatactagagaaccttgctacagtagagtaa
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