Pontibacillus sp. HMF3514: GS400_09405
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Entry
GS400_09405 CDS
T06374
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pof
Pontibacillus sp. HMF3514
Brite
KEGG Orthology (KO) [BR:
pof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pof03016
]
GS400_09405 (truB)
Enzymes [BR:
pof01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GS400_09405 (truB)
Transfer RNA biogenesis [BR:
pof03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GS400_09405 (truB)
Prokaryotic type
GS400_09405 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QHE52233
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Position
1817193..1818107
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AA seq
304 aa
AA seq
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MDGILPLWKPVGMTSHDCVIKMRKILGTKKVGHTGTLDPEVAGMLPMCIGMGTKIAQYVT
ESKKVYEAEVKLGYATETEDAEGAIIDQKAVSSTIGREDLEKTLEGFVGTIIQVPPMYSA
VRVEGKRLYEYAREGIEVERPQRTVTIYDISLLSDHILYDAEGSATFKISITCSKGTYIR
TLCVDIGKALGYPAHMSHLVRTATGSFEKEEGVTFEQIQTAMDEGRIEDYLQPMERGVRH
LDRLYVKQEEEDQVYHGTLFSKPKEMPTTNPFSMISQHGKLLAIYQIHPDKPHLIKPVRV
FQYD
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggatggaatcctgccattatggaagccagttggtatgacatcacatgattgtgtcatc
aaaatgcgtaaaatacttggaacaaaaaaggttggtcacaccggtacccttgatcctgag
gtagctggaatgttgccaatgtgtataggcatgggaacaaagatagcgcagtacgtgact
gagtccaagaaggtgtatgaagcagaagtgaagcttggatatgctacagagactgaagat
gctgaaggtgctattattgaccaaaaagctgtttcatcaacaattggacgtgaagaccta
gaaaaaacgcttgagggttttgtaggaacgatcatccaggtgcctccaatgtattctgct
gttagagtagaagggaagcgcttatatgagtatgcaagagaaggtatcgaagtagagcgt
cctcaaagaacagttacaatatatgatatttcgctcttatcagatcatatcctatatgat
gctgaaggtagtgctacgtttaaaataagcattacatgttcaaaaggaacctatatccgt
acattgtgtgtagatatcggaaaagctcttggataccctgctcacatgtctcatcttgtg
agaacagcaacaggatcttttgaaaaagaagaaggcgtaacatttgaacaaatacagaca
gcaatggatgaaggacgtatcgaagactatttacagcctatggaacgaggggttcgacat
ttagaccgtctgtatgttaaacaagaagaggaagatcaagtgtatcatggtactttattt
tctaaaccgaaagaaatgccaacaacaaatccatttagtatgattagccaacatggtaaa
ttacttgcaatctatcaaattcacccagacaagccccatttaattaagcctgtacgggtg
ttccaatatgactag
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