Pontibacillus sp. HMF3514: GS400_10555
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Entry
GS400_10555 CDS
T06374
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pof
Pontibacillus sp. HMF3514
Brite
KEGG Orthology (KO) [BR:
pof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pof03400
]
GS400_10555
DNA repair and recombination proteins [BR:
pof03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GS400_10555
Archaeal homologous recombinant proteins
GS400_10555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
DUF5790
AAA_15
AAA_21
MerR-DNA-bind
AAA_16
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QHE52445
UniProt:
A0A6P1HMS7
LinkDB
All DBs
Position
complement(2052108..2055224)
Genome browser
AA seq
1038 aa
AA seq
DB search
MRAITITVEAFGPYAKRQTVDFRDLGYESVFLITGPTGAGKTSVFDAMVYALYGRASGSE
RDQDTLRSHFAELEQPTEVSFVFDLKDKRYEVVRAPKQMKKKSRGEGYTEQPPRAELYEI
AGEEKLLLSSKIKDVNETIESMLHLDYEQFRKMVMIPQGEFRRLISENSKEREEILQKIF
QTYVYEHITTRLKDESKELKESISNIEQKERDEIQKLHWSEEDKEGIASSTKALEQLEED
LKQDEKTVEEYQGALKEKRSQLKTAQEKYYKDKQVSEQFQKRDQYEQELKDLKQYENDIE
NKQVKVQKADKAETIRSYEEQAKKWKQEKDKQLVHIQEKTKKLEESQNKFIRTEKTYQEE
DKRQPEREQLKEDIQKAKQDLTKVTRYQELKQELNRLEKQKQEKQSVLKSIQSEKENNQK
LVNQLSQSTFESQSLSKQYYELESKEKELKEGVKQLYRLMDEEKKLSKLRDQYQQVKQNY
EQAKADLEAKQLHVNTLEDQLKQHRALSLAADLTSGEACPVCGSLDHPSPATLEGKDISD
HTLQEAKNKQQQGEQHLQKLQDQFIQTKSEGQSQRHIVEQLLEALSPYLEHAPVQEQNRE
GQKYYWEQQKASITENKNHVAKKIQEIEQQMKKLEQTQNKLKELESKEQEQQNQYQQVHD
KWLGIYTKLEQLEEELPETNRDAQSLNEWVIYEEKRYKSWIQSFEELTKRYQQEKEEKQK
LETELTQQKGYVKDLEQHEKKAFQEWEEACKEKGFETIEEYQNAKLPKEELEMIRKQVEE
FLNKKQTLADSYKALEEELRDVEPPKLNEQLEIMEKQEVAIDQLYQEEQQIKMRIRDHER
IFKQLESYIYDRKAAEEKYFYMGELAELAKGDNTYKLSFERYVLSAFLDEIIVQANIRLD
KMTDHRYQLERSQERAKGGAQSGLDLEVIDHYTGQKRSVKTLSGGEGFKAALSLALGMAD
VIQAHAGGVQLDTLFIDEGFGTLDEASLEQAIDTLKDLQQGDRMLGIISHVPQLKNEIRA
KLHITPSPNGSSLAFSFQ
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
gtgagagccataacgattaccgtagaagcttttggtccctatgcaaaaagacaaactgta
gattttagagaccttggttatgaatccgtttttcttataacgggtccaactggagcagga
aaaacaagtgtattcgatgccatggtgtatgcgttatatggacgtgcaagtggaagtgaa
agagatcaagatacacttcgaagtcactttgctgaattggagcaaccaacagaagtatcg
tttgtttttgatttaaaagataagcgttatgaagtggtacgcgcaccaaagcaaatgaag
aaaaaatctcgtggtgaagggtacacagaacaacctcctcgagcagagctatatgaaatt
gcaggagaagaaaagctattactctcatctaagattaaagatgttaacgaaacaatagaa
agtatgcttcacttggattatgaacaattccgaaaaatggtcatgatccctcaaggtgag
tttcgaagacttatttctgagaatagtaaagaacgggaagagatcttacaaaagatcttt
caaacttatgtttacgaacatattactactagattgaaagatgaatctaaagaattaaaa
gaaagcatctctaatatcgaacaaaaagaacgtgatgaaattcagaagcttcactggtct
gaagaagataaggaaggaatcgcatcaagtacaaaggcacttgaacagcttgaggaagac
ctcaagcaagatgagaaaaccgttgaagaatatcaaggagccttaaaagaaaaacgaagt
caattaaaaactgctcaagaaaagtattataaagacaagcaggtttcggaacaattccaa
aaacgggatcaatatgaacaagaactgaaagacctgaaacagtatgagaatgatatcgaa
aacaaacaggtaaaagttcaaaaagctgacaaagccgaaacaattcgatcctatgaagaa
caagcgaagaaatggaagcaggaaaaagataaacaacttgttcacattcaagaaaaaacg
aaaaaactagaagagtcacagaacaagtttattagaacggaaaagacataccaggaagaa
gataaaagacaaccggagcgtgaacagcttaaagaagatattcaaaaagcaaaacaagat
cttacaaaagttacacgctatcaggagttaaaacaggaacttaatcggttagagaaacaa
aaacaagaaaaacaaagtgtactcaagtctatacagtctgaaaaagagaacaaccaaaag
ctagtgaatcaattatctcagtctacatttgagtcacaatctttatccaagcaatattat
gaactggagtctaaagaaaaagagctcaaagaaggagtcaaacagctttatcgtttaatg
gatgaggagaaaaagctttctaaattgcgagaccaatatcaacaggtaaagcagaattac
gaacaagctaaagctgatcttgaagcgaaacaactacatgtgaacacattagaagatcaa
ctgaaacaacatagagctctttctcttgccgctgacctaacttcaggagaagcatgtcct
gtatgtggttcattagaccatccatctccggctacacttgaaggcaaagatatatctgat
cacaccttgcaagaagccaaaaacaagcaacaacaaggtgaacaacacttacaaaagctc
caagatcaatttatacagacgaagtcagagggtcaatcacagcgccatatcgtagaacag
ttattagaagctttgtctccgtatctcgaacatgccccagttcaggaacaaaatagagaa
ggtcaaaagtattattgggaacaacaaaaagcttctataactgaaaacaaaaatcatgta
gcaaaaaaaatacaagaaattgaacaacagatgaagaagcttgagcaaacacaaaataaa
ctaaaagagcttgaaagcaaagaacaagaacaacaaaatcagtatcagcaagtacatgat
aagtggctcgggatttatacgaaattagaacaactagaagaagaattaccagaaacaaac
agagatgcccaatctcttaatgaatgggtgatatatgaagaaaaacggtataaatcctgg
attcaatccttcgaagagcttacgaaaaggtatcaacaggagaaagaagaaaaacaaaaa
cttgaaacagaattaactcaacaaaaaggctatgtgaaagatcttgagcagcatgagaaa
aaagcctttcaagaatgggaagaggcgtgtaaagaaaaaggttttgaaaccatagaagaa
tatcagaatgcaaagttacctaaagaagaattagaaatgatacgtaagcaagtagaggaa
tttctaaataagaaacaaacgttagcagactcttacaaagcattggaagaagaattacga
gatgttgaaccgcctaaattaaatgaacaattagaaattatggaaaagcaagaagttgct
attgatcaactttatcaagaggaacaacaaattaaaatgcgcattcgagatcacgaacgt
atttttaaacaattggaaagttatatttatgatcgaaaagctgcagaagagaaatacttc
tatatgggggaacttgctgagctggcaaagggagataatacgtataaattatcctttgag
cgctacgtgttatctgcttttcttgatgagattattgttcaagcaaatatccgtttagac
aaaatgacggatcatcgctatcaacttgaacgaagtcaagaacgcgctaaaggaggagcg
caaagtggcttggacctagaggttattgatcactatacaggtcagaagcgatcagttaaa
accttatctggcggtgaagggtttaaagctgctttaagcttagcgcttggtatggcagat
gttatacaagctcatgctggtggcgttcaacttgatacgttatttatcgatgaaggattt
ggaacattagacgaagcatctcttgagcaagcaatcgatactttgaaagatcttcaacaa
ggcgatcgtatgcttggtatcatctctcacgtaccacaattaaagaatgaaataagagca
aaacttcatataacaccatcacctaatggttcaagcttagctttttcgtttcagtaa
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