Pontibacillus sp. HMF3514: GS400_10560
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Entry
GS400_10560 CDS
T06374
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pof
Pontibacillus sp. HMF3514
Brite
KEGG Orthology (KO) [BR:
pof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pof03400
]
GS400_10560 (sbcD)
DNA repair and recombination proteins [BR:
pof03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GS400_10560 (sbcD)
Archaeal homologous recombinant proteins
GS400_10560 (sbcD)
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Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Epimerase_2
DNA_pol_E_B
Motif
Other DBs
NCBI-ProteinID:
QHE52446
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Position
complement(2055227..2056378)
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AA seq
383 aa
AA seq
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MKILHTADWHLGKLVHQLHMTKDQSYILDEFIRIVKEEKPDAIIIAGDLYDRAVPPKEAV
ELLNETLMKLIYDIKVPVLAITGNHDSPDRLNFGSTMFRKQQFYLQAKLDGALEPVTLQD
EHGDVHFYLIPYIEPADARAYFEDESIQTHHDAMSAIVDRIENDNYADERQVLIAHAFMA
GGMESESEERLTMLGGTPYIDAGLFSAFSYVALGHLHQPQRVTDDKIRYAGSLLKYSFSE
ANHKKGVTFVELDENGVSNIREEKLAPKHDMRIKEGYLNNLLEEDDDHSEDYLHIKLLDD
GQLMDPMGKLRKVYPNVLSLERVGFLGQHVQNQRSSVKERQQMSHEELFESFYKEVKGKD
LDDQRKKYVSQTIQNVLAEERGQ
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatattacatactgctgattggcacctgggaaagttggtgcatcagcttcacatg
acaaaagatcaatcatatatactagatgaatttattcgaattgtgaaagaggaaaaaccg
gatgctattattattgctggagacctctatgaccgtgcagttccgccaaaagaagcggtt
gaattattaaatgaaacgttaatgaaattaatttatgatattaaggttccggtccttgcg
attactggaaaccacgatagtcctgaccgtttgaatttcggaagtaccatgtttagaaaa
caacaattctacttacaagctaaacttgatggtgccctggaacctgtaacacttcaggat
gaacatggagatgttcatttttatttgattccttacattgagcccgctgacgcaagagca
tattttgaagatgaatcgattcagacgcatcatgatgcaatgagtgccattgtagaccga
atagaaaacgacaactatgctgatgaacgtcaagtgttaattgctcatgcttttatggca
gggggaatggagtcggaatctgaagagcgcttaacgatgctgggtggaactccatatata
gacgcgggtttattttctgctttttcttatgtagctttaggtcacctacatcaaccacag
cgtgtaacggatgataagattcgttatgctgggtcactcttaaaatactccttttcggaa
gccaatcataaaaaaggggttacgtttgtagagcttgatgaaaatggtgtttcaaacatt
cgagaagagaaactagctccaaaacacgacatgagaattaaggaaggatacctgaataac
ttattagaagaggatgatgaccattcagaagattatcttcatattaaattgttggatgac
ggtcagttgatggacccaatgggcaagcttcgtaaagtttatccaaatgtattgagtcta
gagagggttggttttcttggacaacatgtccaaaatcagcgttcgtctgtaaaagaaaga
cagcagatgtctcatgaagagctatttgaatccttttataaagaagtaaaagggaaagat
cttgatgaccaaagaaagaaatatgttagtcaaacgattcaaaatgtattagcagaagaa
aggggtcaatag
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