KEGG   Pontibacillus sp. HMF3514: GS400_13075
Entry
GS400_13075       CDS       T06374                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pof  Pontibacillus sp. HMF3514
Pathway
pof03030  DNA replication
pof03430  Mismatch repair
pof03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pof00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    GS400_13075
   03430 Mismatch repair
    GS400_13075
   03440 Homologous recombination
    GS400_13075
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pof03032]
    GS400_13075
   03400 DNA repair and recombination proteins [BR:pof03400]
    GS400_13075
Enzymes [BR:pof01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     GS400_13075
DNA replication proteins [BR:pof03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     GS400_13075
DNA repair and recombination proteins [BR:pof03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     GS400_13075
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2 DEDDh_C TMP_N
Other DBs
NCBI-ProteinID: QHE52900
LinkDB
Position
2526374..2527102
AA seq 242 aa
MLPIDIEILKYIFYERHIVSLKMRPFFETDAYHQLKKQLENLSTSEELLSESVMEAPYTI
FDLETTGLLPELGHEIISIGAIRIQGVHQIQYERFHMHVKPLRRVTKRTQQLTGITEEEL
EESDTILKALSAFLEFSKGSVLVAYPAAFDMKFLRTMLKRWKLPDRLPHSIDAQTIVKKL
YPNRKHQLDTMIPFFGITKLARHHALNDATMTAELFQQLLHQLPNEIHTVQDLLSFTEKQ
KS
NT seq 729 nt   +upstreamnt  +downstreamnt
atgcttccgattgatatagagattttaaagtatattttttatgaacgacatatcgttagc
ttgaagatgcgtccgttctttgaaacagatgcttatcaccaattaaaaaaacagcttgag
aacttaagtacaagtgaggaacttttatctgaatctgttatggaagcaccatacactatt
tttgatttagaaacgacaggcttactccctgaattgggacacgagattatctcaattggt
gccattcgcatacaaggtgttcatcagatccaatacgagcgattccatatgcatgttaaa
ccgcttcgacgagttacaaagcgtacacagcaattaacaggtataacagaggaagagcta
gaagaaagcgatacaatccttaaagctctatcagcttttttagagttcagtaaaggatct
gttctagttgcttacccagcagctttcgatatgaagtttttacgaacgatgctaaaacgt
tggaagctacctgatcgacttccacattctattgatgcacaaacgatcgtgaagaagctg
tatccaaatcgaaaacaccaattagatactatgattccattcttcggaatcactaagctt
gccagacatcatgctttaaatgatgctacgatgacagctgaattatttcaacagctttta
catcagttaccgaatgaaattcatacggtgcaagatctcttatcttttacagaaaagcaa
aagagctga

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