Pontibacillus sp. HMF3514: GS400_13580
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Entry
GS400_13580 CDS
T06374
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
pof
Pontibacillus sp. HMF3514
Pathway
pof03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GS400_13580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pof03400
]
GS400_13580
Enzymes [BR:
pof01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
GS400_13580
DNA repair and recombination proteins [BR:
pof03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
GS400_13580
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
QHE52985
UniProt:
A0A6P1HPD0
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All DBs
Position
2615538..2616437
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AA seq
299 aa
AA seq
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MLKLGSHVSMSGKNMLKGASEEAASYGANTFMIYTGAPQNTRRKAIEDLNIEAGLAHMEE
QSIEEIVVHSAYIINIGNTVKPHVYELGVDFLTNEIERVEALNKANQIVLHPGSHVSQGQ
EIGLQQIIKGLNEVFANKPDTKCQIALETMAGKGSELGRSFEELATIIEGVEDSDKLSVC
FDTCHTHDAGYDIVNDFDGVLDEFDRIIGLDRLKVLHINDSKNERGAGKDRHENIGYGHI
GFEALNYIVHHPRLADIPKILETPYVGEDKKNKKPPYQYEIESLRSQTFTDWRSELLNS
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaactaggttcccacgtatccatgagcgggaaaaacatgctaaaaggtgcgagc
gaagaagccgcttcttatggcgctaatacattcatgatttatacaggtgctccacaaaat
acaagacgtaaagcgatcgaagatttaaacatcgaggctggccttgcacatatggaagag
caaagcattgaagaaatcgttgtccactctgcttatatcattaatattggaaacactgta
aaacctcacgtatatgagctaggcgttgatttcctaacaaatgaaattgaacgagtggaa
gctttaaacaaagcaaaccaaatcgtacttcacccaggttcccatgttagccaaggtcaa
gaaattggcttacaacaaatcattaaaggtcttaatgaagttttcgctaacaaaccagat
accaaatgccaaattgctctagaaacaatggctggtaaaggtagtgaacttggacgtagt
tttgaagaacttgccacgatcattgaaggtgtggaggatagcgacaagctttcagtctgt
tttgatacctgtcacacacatgatgcaggctacgacatcgtcaatgactttgacggtgtt
ttggacgagttcgaccgaatcatcggacttgatcgccttaaggttctccatattaatgac
agtaaaaatgaacgcggtgctggtaaagaccgacatgagaacattggatatggtcacatt
ggatttgaagcacttaactacattgtgcaccatccaaggcttgccgatattccaaagatt
ttagaaacgccatatgtaggtgaagataagaaaaacaaaaagcctccttatcaatatgaa
atcgaaagcttacgttctcaaaccttcacggattggagatcagaactgttaaacagttaa
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