Pontibacillus sp. HMF3514: GS400_13585
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Entry
GS400_13585 CDS
T06374
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
pof
Pontibacillus sp. HMF3514
Brite
KEGG Orthology (KO) [BR:
pof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pof03019
]
GS400_13585
03009 Ribosome biogenesis [BR:
pof03009
]
GS400_13585
Enzymes [BR:
pof01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GS400_13585
Messenger RNA biogenesis [BR:
pof03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GS400_13585
Ribosome biogenesis [BR:
pof03009
]
Prokaryotic type
rRNA helicases
GS400_13585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Flavi_DEAD
CMS1
Helicase_RecD
Beta-Casp
Motif
Other DBs
NCBI-ProteinID:
QHE52986
UniProt:
A0A6P1HLU3
LinkDB
All DBs
Position
complement(2616633..2617955)
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AA seq
440 aa
AA seq
DB search
MTDQKFQSFGLQPMMNDIISKLNFQEPTPIQQKVIPSVLRNDSIIGQSHTGSGKTHAYLI
PLLNQIDASKKEVQVVITAPTRELATQIYNEVRKMIQLGEKEQDWRAKLLVGGTDKQKTM
EKLKEQPQIVVGTPGRILDLIKEGALDTYTAKSMVIDETDLMLDLGFIEEVDQILVRMDR
EVQILVFSATIPERLKPFLNKYLENPAHIHAEEKKPSPENMEHRLIPLRHRDKADMIIKV
SELIQPYLAIIFANKKERADELAAELTQKGLEVGVIHGGLSPRERKRVLKDIQNLRYQYI
VATDLAARGIDIQGVSHVINADLPKEEEFYIHRVGRTARAGLEGTAINLYTDEDEKLIAK
LEKSGIQFDRYDIKKGEWELIKDWNERSARKKQENETDREAWKKVRKPKKVKPGYKKKMK
RQQEAIKKKMNPNPKNNRRK
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgacagatcaaaaattccaatcatttggattacaaccaatgatgaatgatattatttct
aagttaaattttcaggagcctacacctattcaacaaaaggtgattccttctgtattacgc
aatgacagcatcatcggccaatctcatacaggttctgggaaaacacatgcgtacctaatc
ccattgcttaatcagattgatgcttctaaaaaggaagttcaggtggtcattacagctccc
acgagagagctagcaacacaaatttataatgaagtccgtaagatgattcaattaggagaa
aaagaacaagactggcgtgctaagttgcttgttggtggtacagataagcaaaagacaatg
gaaaagttaaaagagcagccacaaattgttgtgggtacacctggccgcattcttgattta
atcaaagaaggtgcacttgatacctacacagctaaatccatggtgatcgatgaaacggat
cttatgttggatttagggtttattgaagaagtagaccaaatccttgttcgaatggatcga
gaagtacagatcttagtcttctctgcaaccattcctgagcgcctaaaaccattcttgaac
aagtatctagagaatccagctcacatccatgctgaggaaaagaaaccttcccctgaaaat
atggagcataggttaattcctcttcgacatcgtgataaagcggatatgattatcaaagtt
tcagaactgattcagccatatttggcaatcattttcgctaataaaaaagaacgagctgat
gaactagcagctgagctaactcaaaaagggttagaagttggtgttattcatggtggatta
tctccacgtgaacgtaagcgcgttcttaaggacattcaaaacctccgttatcaatacatt
gtcgcaacagatctagcggctcgaggtattgatattcaaggagttagtcatgtgattaac
gccgatttacctaaagaagaggagttctatatccaccgtgttggtcgtacagctcgagct
gggttagaaggtactgcgattaacctttatacggatgaagacgaaaagttaatcgctaag
cttgaaaaatccggtattcaatttgatcgttatgatattaaaaaaggcgagtgggagctc
attaaggattggaatgagcgttctgcccgtaaaaagcaagaaaacgaaacggaccgtgaa
gcttggaagaaagtacgaaagcctaaaaaagttaagccaggatataaaaagaaaatgaaa
cgtcaacaagaagcgattaaaaagaaaatgaaccctaatccgaagaacaatagaagaaaa
taa
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