Pontibacillus sp. HMF3514: GS400_14125
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Entry
GS400_14125 CDS
T06374
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pof
Pontibacillus sp. HMF3514
Pathway
pof03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GS400_14125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pof03400
]
GS400_14125
Enzymes [BR:
pof01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
GS400_14125
DNA repair and recombination proteins [BR:
pof03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GS400_14125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
UvrD-helicase
AAA_12
nSTAND3
AAA_22
AAA
DUF815
TsaE
NPHP3_N
AAA_16
DUF5700
Rad17
RsgA_GTPase
AAA_28
DUF4926
T2SSE
TrwB_AAD_bind
DEAD
NACHT
SLFN-g3_helicase
CbiA
AAA_23
AAA_29
Motif
Other DBs
NCBI-ProteinID:
QHE53087
UniProt:
A0A6P1HKA8
LinkDB
All DBs
Position
complement(2725113..2727443)
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AA seq
776 aa
AA seq
DB search
MAMEEQLEGQLDTERGFIKGESVRMIYHNDEEHFSIALIRIEETNESIEDSEVVVKGHFS
PLDKGEMYIFYGDLKDHPKFGEQYQVNHYQKDIPTSKEGIVLYLSSDLFYGIGKTTAERI
VATLGDRAIQHILQNPSVLDDVPYLKRDKADQLVADLRKHQGFEHVVIALSEYGFGLQMA
QKIYEAYQDKALEVLQDNPYQFVFDIDGFGFKRADEIASKHQISMDHPTRIQAACLYAIN
QWVQQGHVYAPSERFAEEVLAVLNDEEGMISNDIISREMKQLADEEKVILENGNIYLPSL
YYAESGFVQQLHRVMLNEVEEEYTQAELMKIVGEIEDEEDLSYGKEQFEAIEKALNSNIM
ILTGGPGTGKTTVIKGIITAYAKMNRKSLKPADYDQDEPYPFLLTAPTGRAAKRMNESTG
IPAVTIHRLLGWTGGEAFERDHNNPLTGKILIIDEFSMVDIWLANQLFRAIPEGMQVLLV
GDDDQLPSVGPGQVLSDLISSEKIPAVQLQEVYRQKEGSKIIQLAHDMKRGTCDRQSLTK
ANDFNFISCPEPQVLPVIEKVYAKAMEKGHNLKDIQILAPMYRSKIGIHSLNHDIQQLAN
PPSRQKREIQLKDLTYRTGDKVIQLINQPESGVYNGDIGEIVAIYKEDETQEQKEKLTVS
FEGKEVEYLKKDLTQITHAYCTSIHKSQGSEFQIVILPVVRGFSRMLRRNLLYTAVTRSK
QSLIICGDEEAFIRGVNTVDTNQRYTTLQERLQELLDRPEDDEQDDEEELSPYDFM
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atggcaatggaagagcaattagaaggacaattggatacagaacgtggctttatcaaaggt
gaatccgttcgtatgatttaccataatgatgaagagcacttttccattgcacttattcgt
atcgaggaaacgaatgagtcgattgaagatagtgaagtcgtggtaaaaggtcatttttct
cctttagataaaggggaaatgtacattttttatggagatttaaaggatcaccctaaattt
ggtgagcaataccaggttaatcattatcaaaaggatatcccgacatctaaagaggggatt
gtcctatacttatctagtgacttattttatggaattggaaaaacaacagctgagcggatt
gttgcaacgctaggcgaccgtgctatccaacatatattacaaaatccttctgttctcgat
gatgttccatacttaaaacgtgataaagcggatcaacttgtagcagacctacgcaaacat
caagggtttgaacatgttgttattgcgttatcggagtatgggtttgggttgcaaatggca
caaaagatatatgaggcttatcaagataaagcattagaggttcttcaggacaatccttat
cagtttgtttttgatatcgatggatttgggtttaaaagggcagatgaaatcgcatctaaa
caccaaataagcatggaccatcccactcgtattcaggctgcttgtctttatgccataaat
cagtgggtccaacaaggtcatgtttatgcgccttctgaacggtttgcagaagaagtatta
gcagttttaaatgatgaagagggtatgatatccaatgatattatttcccgagaaatgaaa
cagctggctgatgaagagaaagtcatattggagaacggcaatatttacttgccatcttta
tactatgcagaatcaggctttgttcaacagcttcatcgagtgatgttaaatgaagtagag
gaagaatatacccaagcagaactgatgaaaattgtaggtgagattgaagacgaagaagat
cttagttatggtaaagagcaatttgaagctatagaaaaagcgctcaattcaaatattatg
attttgacaggtggtcctggtactgggaaaactaccgttattaaagggattattaccgcc
tacgctaaaatgaatcgaaagtcgttaaagcctgcagattatgatcaagatgagccctac
cctttcttacttacagctccaacaggtcgggcagcaaaacgcatgaatgaatctactggt
atccctgcggtaaccattcataggcttttaggttggactggtggtgaagcctttgaacga
gaccacaacaatcctctgacgggaaaaatacttattattgatgagttttcaatggtagat
atatggcttgctaatcaattgtttcgagctatccctgaaggcatgcaagtgctcttagta
ggggacgatgatcagcttccttctgtaggtccaggtcaagtcttatcggatttaatctct
tcagagaagatacctgcagttcagttacaggaagtgtatcgccaaaaagaaggctctaag
attattcaactagcccatgatatgaaacgagggacttgtgatcgtcaatccttaacgaag
gcgaatgactttaatttcatttcatgtccagaaccacaagttttgcccgtgattgaaaaa
gtgtacgctaaagcaatggagaaagggcataaccttaaagatattcaaattttagctcct
atgtatcgttccaagattgggatccattcgctaaatcatgatattcagcaattggcgaac
ccaccttcgagacaaaaaagagaaattcagttaaaggatttaacctatcgaactggggat
aaagtgattcagctcataaatcagcctgaatctggggtttataatggagatatcggtgaa
attgtagccatttacaaagaagatgaaacacaggagcagaaggaaaagctgaccgtttca
tttgaagggaaagaggttgaatatctaaaaaaagatttaacccaaatcacccatgcatac
tgcacgtcgatccacaaatctcaaggtagtgaattccagattgtgattttacctgtagtt
cgtgggttttctcgtatgcttcgtcgaaacttattgtacactgctgttacaagaagtaag
cagtcgttaatcatttgtggtgatgaagaggcatttatacgtggtgtgaatacggtggat
acaaaccagcgctacacaactctccaagaaagattgcaggaactactggatcgacctgaa
gatgatgaacaggatgatgaggaagaactttccccttatgactttatgtaa
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