Pontibacillus sp. HMF3514: GS400_15335
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Entry
GS400_15335 CDS
T06374
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
pof
Pontibacillus sp. HMF3514
Brite
KEGG Orthology (KO) [BR:
pof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pof03016
]
GS400_15335 (thpR)
Enzymes [BR:
pof01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
GS400_15335 (thpR)
Transfer RNA biogenesis [BR:
pof03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
GS400_15335 (thpR)
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
HVSL
Motif
Other DBs
NCBI-ProteinID:
QHE53310
UniProt:
A0A6P1HJJ5
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All DBs
Position
complement(2986948..2987508)
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AA seq
186 aa
AA seq
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MSSHYFIGIPLPEHVRTWLKEWQEQMKRDLSYGVWTHELDFHITLKFLGAVEEDNIHLLR
ENLKDIQVSSFEIKIGELGHFGNPHQPRVVWAGAEKHQQLLALQKEVEVACENLGFPPEK
RSYNPHITLAKKWRGDKELDQKLEALYDHLNRVDSITVDHFTLFKIHPKSNQKYEAIQRF
PLQGNK
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgagttcacattattttattggaattcctttgcctgagcatgtacgtacatggttaaaa
gaatggcaggaacaaatgaaaagagatctgtcctatggtgtttggacacatgagttggat
tttcatattacattgaaatttctaggggctgtggaggaagacaatatacatttattaaga
gaaaacctcaaagatatccaagtctcttcatttgaaatcaaaattggggaactaggtcat
tttggcaacccccatcaaccaagagtggtatgggcaggagctgagaaacatcaacaactt
ttagcgcttcaaaaagaagttgaggttgcatgcgaaaacttaggttttcctcctgaaaag
agatcttataatcctcacattacattagcgaaaaaatggagaggggataaggaacttgat
caaaaactagaagctttatatgatcatttgaatagggtggatagtataacagtcgatcat
tttacactgtttaaaattcatccaaaatcgaatcaaaaatatgaagctattcaacgtttt
cctctacaaggcaataaatga
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