Pontibacillus sp. HMF3514: GS400_16770
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Entry
GS400_16770 CDS
T06374
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
pof
Pontibacillus sp. HMF3514
Pathway
pof03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GS400_16770 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pof03400
]
GS400_16770 (uvrB)
DNA repair and recombination proteins [BR:
pof03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GS400_16770 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GS400_16770 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
TrwB_AAD_bind
UvrD-helicase
AAA_22
AAA_7
DUF87
AAA
ComC_N
Microtub_bd
PMT2_N
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
QHE53566
LinkDB
All DBs
Position
complement(3263438..3265417)
Genome browser
AA seq
659 aa
AA seq
DB search
MEKKFDLVSQYQPQGDQPRAIQEITEGIRNGKQHQTLLGATGTGKTFTMSNVIQEVNKPT
LVIAHNKTLAGQLYSEFKEFFPNNAVEYFVSYYDYYQPEAYVPSTDTFIEKDASINDEID
KLRHSATSALFERRDVIIVASVSCIYGLGSPEEYRNLVLSLRSGMEKDRDQLLRDLVDIQ
YARNDIDFQRGTFRVRGDSVEIIPASREEHCIRVEFFGDEIDRIREVDALTGEIMGDREH
VAIFPASHFVTREEKMKVAIKNIEQELQERIKELKDQDKLLEAQRIEQRTNYDLEMMREM
GFCSGIENYSRHLTLREPGSTPYTLMDYFPDDFLMVVDESHVTLPQVRGMYNGDQARKKV
LVDHGFRLPSAMDNRPLTFEEYEGKMNQNVYVSATPGPYEQEHSPEMVEQIIRPTGLLDP
EISVRPIEGQIDDLIGEIHKRRERNERVLVTTLTKKMSEDLTDYLKELDIKVAYLHSEIK
TLERIEIIRDLRRGKYDVLVGINLLREGLDIPEVSLVSILDADKEGFLRSERSLIQTVGR
AARNENGQVIMYADKVTKSMQIAIDETNRRREKQMAYNEEHGITPTTIKKEIRDVIRATV
ESEEEETQDEKPQVANMSKKEKEKMIDNMETEMKQAAKDLDFEKAAELRDLILELKAEG
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaagaaatttgatttggtctcacaatatcaacctcaaggggaccaacctcgtgcg
attcaggaaattactgaaggaattcggaacggaaagcagcatcaaacgttattaggtgct
acgggaacagggaaaacgttcacgatgtctaatgttattcaagaagtgaacaaaccgacg
ttagtgatcgctcacaacaaaacgctcgcagggcagctttatagtgagtttaaagagttc
ttcccgaacaacgcggttgagtattttgtcagttactatgattactaccaaccagaagcg
tatgtcccttcaacggatacgtttattgaaaaagatgcaagcatcaatgatgaaattgat
aagctacgccactcggctacgtctgccttatttgaacgtcgagacgttattatcgtggct
agtgtttcatgtatatatggtttaggttctccagaagaatatcgtaacttagtgctttct
ctacgttctgggatggaaaaagatcgcgatcagctactacgtgatttggtagacattcaa
tatgctcgtaacgatatcgacttccaacgtggtacgtttcgcgtccgaggtgattcagtt
gaaattatcccagcttctcgtgaagagcactgcattcgtgtggagttttttggtgatgaa
attgatcgaatccgtgaagttgatgccttaacaggtgagattatgggtgaccgtgaacac
gtagctattttcccagcttctcacttcgtaacgcgtgaagagaagatgaaggtagcgatt
aaaaatatcgaacaagaactccaagaacggattaaggaattaaaagatcaggacaagctt
ttagaggcgcaacgcattgagcaacgtaccaattacgatctagaaatgatgcgtgagatg
ggattctgttcaggaattgagaactattcacgtcatttaacactaagagaaccaggttca
acaccatatacactcatggactattttccagatgatttcttaatggtggtagatgaatct
cacgtaacattaccacaggtgcgtggcatgtataacggggaccaagcaaggaaaaaggtg
ctcgtagaccatgggttccgtttaccttctgcaatggataaccgtcctcttacgtttgaa
gagtacgaaggcaaaatgaatcagaatgtatatgtgtctgctacgccaggaccttatgaa
caagagcattctcctgaaatggttgaacaaataatccgtccaactggtttattggatcca
gaaattagtgtgcgtccaattgaaggtcagattgatgacttgattggtgagattcataaa
cgaagagaacggaatgagcgggttcttgttacaacattaacgaagaaaatgtctgaggat
ttaacggattacttaaaagaattagatatcaaggtagcgtacttacactctgaaatcaaa
acccttgagcgaattgaaatcattcgggatttacgacgtggaaaatatgacgttctggtc
ggaatcaacttgcttcgtgaggggcttgatatcccagaggtgtcattagtatccatttta
gatgcggacaaagaaggtttcttacgttcagaacgttctctcattcaaactgtaggacgt
gcagctcgtaacgaaaacggccaagttattatgtacgctgataaagtaacgaaatctatg
caaattgccattgatgaaacgaaccgtcgtcgtgaaaaacaaatggcttacaatgaggag
cacggaattacaccaacaacgattaagaaagagattcgcgatgtgattcgtgcaactgtg
gagtcagaagaagaggagactcaagacgaaaagcctcaagtagccaatatgagcaagaaa
gaaaaagagaagatgatcgacaacatggaaacagaaatgaagcaggctgcaaaagattta
gatttcgaaaaagcagcagaactgcgcgatttaatcttggagcttaaagcggaaggatga
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